RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MCRIP2Q9BUT9 160 aaKnown RBP11.49□□□□□ -0.57
HDAC9-208ENST00000417496 HILPDAQ9Y5L2 63 aa11.49□□□□□ -0.57
HDAC9-208ENST00000417496 A0A1W2PRD5 423 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 A0A1W2PRF3 423 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 A0A1W2PRM7 423 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 I3L2K1 104 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 IGLV2-11P01706 119 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 BTF3P20290 206 aaKnown RBP11.48□□□□□ -0.57
HDAC9-208ENST00000417496 FBLN7Q53RD9 439 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 ONECUT1Q9UBC0 465 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 GOLT1BQ9Y3E0 138 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 ZNF785A8K8V0 405 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 IGLL1P15814 213 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 OR8B3Q8NGG8 313 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 NGBQ9NPG2 151 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 LAMTOR2Q9Y2Q5 125 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 CACNA1BQ00975 2339 aa11.48□□□□□ -0.57
HDAC9-208ENST00000417496 TIMM23O14925 209 aa11.47□□□□□ -0.57
HDAC9-208ENST00000417496 HINT1P49773 126 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-208ENST00000417496 COL5A1-AS1Q5SY13 56 aa11.47□□□□□ -0.57
HDAC9-208ENST00000417496 TIMM8BQ9Y5J9 83 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-208ENST00000417496 CD3EP07766 207 aa11.47□□□□□ -0.57
HDAC9-208ENST00000417496 PLP1P60201 277 aa11.47□□□□□ -0.57
HDAC9-208ENST00000417496 Q86TA4 180 aa11.47□□□□□ -0.57
HDAC9-208ENST00000417496 MRPL52Q86TS9 123 aaKnown RBP11.47□□□□□ -0.57
HDAC9-208ENST00000417496 MUC15Q8N387 334 aa11.47□□□□□ -0.57
HDAC9-208ENST00000417496 IGF2RP11717 2491 aa11.47□□□□□ -0.57
HDAC9-208ENST00000417496 WNK2Q9Y3S1 2297 aa11.46□□□□□ -0.57
HDAC9-208ENST00000417496 HRNRQ86YZ3 2850 aaPredicted RBP11.46□□□□□ -0.57
HDAC9-208ENST00000417496 B9A039 149 aa11.46□□□□□ -0.57
HDAC9-208ENST00000417496 SIAH2O43255 324 aa11.46□□□□□ -0.57
HDAC9-208ENST00000417496 FOSL1P15407 271 aa11.46□□□□□ -0.57
HDAC9-208ENST00000417496 TSPOP30536 169 aa11.46□□□□□ -0.57
HDAC9-208ENST00000417496 ARF6P62330 175 aa11.46□□□□□ -0.57
HDAC9-208ENST00000417496 FAM120AOSQ5T036 256 aa11.46□□□□□ -0.57
HDAC9-208ENST00000417496 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.57
HDAC9-208ENST00000417496 FAM90A27PA6NNH2 459 aa11.46□□□□□ -0.58
HDAC9-208ENST00000417496 TNFRSF14Q92956 283 aa11.46□□□□□ -0.58
HDAC9-208ENST00000417496 IGHV1-24A0A0C4DH33 117 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 H0Y8G0 127 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 K7EIM0 57 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 M0R3E3 92 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 NDUFB8O95169 186 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 CSN3P07498 182 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 ZC2HC1AQ96GY0 325 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 TRAV9-2A0A087WT02 112 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 KLHDC1Q8N7A1 406 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 OTORQ9NRC9 128 aa11.45□□□□□ -0.58
HDAC9-208ENST00000417496 CHEK1O14757 476 aa11.44□□□□□ -0.58
HDAC9-208ENST00000417496 RBPJQ06330 500 aa11.44□□□□□ -0.58
HDAC9-208ENST00000417496 KLRD1Q13241 179 aa11.44□□□□□ -0.58
HDAC9-208ENST00000417496 ZNF492Q9P255 531 aa11.44□□□□□ -0.58
HDAC9-208ENST00000417496 LY6LH3BQJ8 138 aa11.44□□□□□ -0.58
HDAC9-208ENST00000417496 IL4P05112 153 aa11.44□□□□□ -0.58
HDAC9-208ENST00000417496 ZNF672Q499Z4 452 aaPredicted RBP11.44□□□□□ -0.58
HDAC9-208ENST00000417496 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
HDAC9-208ENST00000417496 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
HDAC9-208ENST00000417496 TRBV19A0A075B6N1 114 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 OVOL3O00110 214 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 LINC00614P0C842 121 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 FCGR2BP31994 310 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-208ENST00000417496 CDSNQ15517 529 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 CT83Q5H943 113 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 LOC102724200A0A096LPH7 203 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-208ENST00000417496 hDV102S1A0JD36 115 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 NPIPB6E9PJ23 425 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 APOHP02749 345 aaPredicted RBP11.43□□□□□ -0.58
HDAC9-208ENST00000417496 ARMS2P0C7Q2 107 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 RBM14Q96PK6 669 aaKnown RBP11.43□□□□□ -0.58
HDAC9-208ENST00000417496 PMCHL2Q9BQD1 86 aa11.43□□□□□ -0.58
HDAC9-208ENST00000417496 ZFHX3Q15911 3703 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 OR4C46A6NHA9 309 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 IGHV3-23P01764 117 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 CRIP1P50238 77 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 FOXC1Q12948 553 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 HES1Q14469 280 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 UNQ5815/PRO19632Q6UWF5 114 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 ZNF491Q8N8L2 437 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 ZFP30Q9Y2G7 519 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 LEPROTL1O95214 131 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 BPIFA4PQ86YQ2 179 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 SHANK2-AS3Q9BTD1 123 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 TMEM14CQ9P0S9 112 aa11.42□□□□□ -0.58
HDAC9-208ENST00000417496 SPTBN1Q01082 2364 aaKnown RBP11.42□□□□□ -0.58
HDAC9-208ENST00000417496 AKAP6Q13023 2319 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 MUC21A0A0G2JKD1 596 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 MUC21A0A140T8X8 626 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 GAGE1Q13065 139 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 MUC21Q5SSG8 566 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 SIGLEC15Q6ZMC9 328 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 GFRA4Q9GZZ7 299 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 TMSB15BA0A087X1C1 80 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 SYS1-DBNDD2H3BUS1 97 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 OR4F17Q8NGA8 305 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 C8orf49Q96NF6 230 aa11.41□□□□□ -0.58
HDAC9-208ENST00000417496 TMUB1Q9BVT8 246 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms