RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SRP19P09132 144 aaKnown RBP15.13■□□□□ 0.01
SHANK3-202ENST00000414786 ZNF497Q6ZNH5 498 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 PAQR4Q8N4S7 273 aaPredicted RBP15.13■□□□□ 0.01
SHANK3-202ENST00000414786 LYZL4Q96KX0 146 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 CHD3Q12873 2000 aaKnown RBP15.13■□□□□ 0.01
SHANK3-202ENST00000414786 DOCK6Q96HP0 2047 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 TMEM158Q8WZ71 300 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 TRIOBPQ9H2D6 2365 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 LAMTOR2Q9Y2Q5 125 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 TRBV5-3A0A0A0MS03 114 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 F2Z2F3 143 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 NEGR1Q7Z3B1 354 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 CHKB-CPT1BH3BT56 60 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 LINC01590Q5TEZ4 76 aa15.13■□□□□ 0.01
SHANK3-202ENST00000414786 KIF13BQ9NQT8 1826 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 TNFSF13O75888 250 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 NR2C2APQ86WQ0 139 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 DOCK3Q8IZD9 2030 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 C9JAW5 83 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 SRSF3P84103 164 aaKnown RBP15.12■□□□□ 0.01
SHANK3-202ENST00000414786 BCL6BQ8N143 479 aaPredicted RBP15.12■□□□□ 0.01
SHANK3-202ENST00000414786 TCF15Q12870 199 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 A0A1B0GW15 77 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 LRCOL1A6NCL2 159 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 LINC01619G3V211 115 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 MORN5Q5VZ52 161 aa15.12■□□□□ 0.01
SHANK3-202ENST00000414786 ZNRF2Q8NHG8 242 aa15.11■□□□□ 0.01
SHANK3-202ENST00000414786 TRBV7-1A0A0A6YYK4 115 aa15.11■□□□□ 0.01
SHANK3-202ENST00000414786 A0A1W2PRE2 83 aa15.11■□□□□ 0.01
SHANK3-202ENST00000414786 MLANAQ16655 118 aa15.11■□□□□ 0.01
SHANK3-202ENST00000414786 TIMP3P35625 211 aa15.11■□□□□ 0.01
SHANK3-202ENST00000414786 COL6A6A6NMZ7 2263 aa15.11■□□□□ 0.01
SHANK3-202ENST00000414786 TMEM178BH3BS89 294 aa15.1■□□□□ 0.01
SHANK3-202ENST00000414786 J3QKU1 62 aa15.1■□□□□ 0.01
SHANK3-202ENST00000414786 NHLRC3Q5JS37 347 aa15.1■□□□□ 0.01
SHANK3-202ENST00000414786 TRBV25-1A0A075B6N4 114 aa15.1■□□□□ 0.01
SHANK3-202ENST00000414786 SMIM10L1P0DMW3 83 aa15.1■□□□□ 0.01
SHANK3-202ENST00000414786 SMIM10Q96HG1 83 aa15.1■□□□□ 0.01
SHANK3-202ENST00000414786 CR1LQ2VPA4 569 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 C20orf204Q6ZNR8 217 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 RFNGQ9Y644 331 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 TRAV26-2A0A0B4J265 109 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 VCYO14598 125 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 CFHR2P36980 270 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 GUSBP1Q15486 140 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 MYMXA0A1B0GTQ4 84 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 DYSFO75923 2080 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 PTPRFP10586 1907 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 WNK2Q9Y3S1 2297 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 TEX48A0A1B0GUV7 120 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 CRLF1O75462 422 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 CCL20P78556 96 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 DNAJC30Q96LL9 226 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 EP300Q09472 2414 aaPredicted RBP15.09■□□□□ 0.01
SHANK3-202ENST00000414786 PLEKHB2Q96CS7 222 aa15.09■□□□□ 0.01
SHANK3-202ENST00000414786 NPDC1Q9NQX5 325 aaPredicted RBP15.09■□□□□ 0.01
SHANK3-202ENST00000414786 CD59P13987 128 aa15.08■□□□□ 0.01
SHANK3-202ENST00000414786 XCL1P47992 114 aa15.08■□□□□ 0
SHANK3-202ENST00000414786 DUTP33316 252 aaKnown RBP15.08■□□□□ 0
SHANK3-202ENST00000414786 C8orf49Q96NF6 230 aa15.08■□□□□ 0
SHANK3-202ENST00000414786 NDUFAF3Q9BU61 184 aa15.08■□□□□ 0
SHANK3-202ENST00000414786 APOC4P55056 127 aa15.08■□□□□ 0
SHANK3-202ENST00000414786 NABP1Q96AH0 204 aa15.08■□□□□ 0
SHANK3-202ENST00000414786 ARFGEF1Q9Y6D6 1849 aa15.08■□□□□ 0
SHANK3-202ENST00000414786 BUB1B-PAK6H3BSN5 160 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 CRYGCP07315 174 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 ATP5IP56385 69 aaPredicted RBP15.07■□□□□ 0
SHANK3-202ENST00000414786 SEC11AP67812 179 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 LINC00587B1AMM8 73 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 IGFBPL1Q8WX77 278 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 RGPD3A6NKT7 1758 aaPredicted RBP15.07■□□□□ 0
SHANK3-202ENST00000414786 FAM90A2PQ658T7 463 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 AMN1Q8IY45 258 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 LTBP4Q8N2S1 1624 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 COL11A1P12107 1806 aaPredicted RBP15.07■□□□□ 0
SHANK3-202ENST00000414786 SCN5AQ14524 2016 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 USP54Q70EL1 1684 aa15.07■□□□□ 0
SHANK3-202ENST00000414786 G3V318 75 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 GAS1P54826 345 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 IFITM2Q01629 132 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 TMEM242Q9NWH2 141 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 ASPHD1Q5U4P2 390 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.06■□□□□ 0
SHANK3-202ENST00000414786 CD177Q8N6Q3 437 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 LIME1Q9H400 295 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 QSER1Q2KHR3 1735 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.06■□□□□ 0
SHANK3-202ENST00000414786 MST1LQ2TV78 715 aa15.06■□□□□ 0
SHANK3-202ENST00000414786 TCF20Q9UGU0 1960 aaKnown RBP15.05■□□□□ 0
SHANK3-202ENST00000414786 IGHV3-30P01768 117 aa15.05■□□□□ 0
SHANK3-202ENST00000414786 IGHV3-33P01772 117 aa15.05■□□□□ 0
SHANK3-202ENST00000414786 IGHV3-30-3P0DP02 117 aa15.05■□□□□ 0
SHANK3-202ENST00000414786 IGHV3-30-5P0DP03 117 aa15.05■□□□□ 0
SHANK3-202ENST00000414786 TM2D1Q9BX74 207 aa15.05■□□□□ 0
SHANK3-202ENST00000414786 MSMBP08118 114 aa15.05■□□□□ 0
SHANK3-202ENST00000414786 SUPT4H1P63272 117 aaKnown RBP15.05■□□□□ -0
SHANK3-202ENST00000414786 C18orf12Q96KH6 178 aa15.05■□□□□ -0
SHANK3-202ENST00000414786 CTHRC1Q96CG8 243 aa15.05■□□□□ -0
SHANK3-202ENST00000414786 GLI3P10071 1580 aa15.05■□□□□ -0
SHANK3-202ENST00000414786 FAM90A9PA6NNJ1 464 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms