RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 RALGAPA1Q6GYQ0 2036 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 POLR1AO95602 1720 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV4-28A0A0C4DH34 117 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 IGKV1-8A0A0C4DH67 115 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 INS-IGF2F8WCM5 200 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 K7EM74 188 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 ATOX1O00244 68 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 OR1I1O60431 355 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 CREBL2O60519 120 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV3-7P01780 117 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 HLA-DQA1P01909 254 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 HBDP02042 147 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 CD7P09564 240 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 FAUP35544 74 aaKnown RBP2.71□□□□□ -1.98
SF3B1-203ENST00000414174 MPV17P39210 176 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 SSR2P43308 183 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 DAPP51397 102 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF136P52737 540 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF138P52744 262 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 RPL23P62829 140 aaKnown RBP2.71□□□□□ -1.98
SF3B1-203ENST00000414174 ADIGQ0VDE8 80 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 KLF9Q13886 244 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-203ENST00000414174 MPV17LQ2QL34 196 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 ORMDL2Q53FV1 153 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF678Q5SXM1 525 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 Q6ZSV7 163 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 MDP1Q86V88 176 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 ODF3L1Q8IXM7 274 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 CEND1Q8N111 149 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 C3orf56Q8N813 242 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 FAM213BQ8TBF2 198 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 C10orf105Q8TEF2 133 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 TAF15Q92804 592 aaKnown RBP eCLIP2.71□□□□□ -1.98
SF3B1-203ENST00000414174 FGF13Q92913 245 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 C11orf52Q96A22 123 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 UPK3BQ9BT76 320 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 DOCK5Q9H7D0 1870 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 ITSN1Q15811 1721 aa2.71□□□□□ -1.98
SF3B1-203ENST00000414174 TNRC6AQ8NDV7 1962 aaKnown RBP2.7□□□□□ -1.98
SF3B1-203ENST00000414174 C10orf71Q711Q0 1435 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 CROCCQ5TZA2 2017 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 DLC1Q96QB1 1528 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 IGKV1-27A0A075B6S5 117 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV3OR16-12A0A075B7B8 117 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 TRAV1-1A0A0B4J248 108 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 COX7A2P2O60397 106 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 IGKV1-5P01602 117 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 SRP19P09132 144 aaKnown RBP2.7□□□□□ -1.98
SF3B1-203ENST00000414174 SMIM13P0DJ93 91 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 IGHV4-30-4P0DP06 118 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 IGLL1P15814 213 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF823P16415 610 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 CSN1S1P47710 185 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 DYNLT3P51808 116 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 ATP5EP56381 51 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-203ENST00000414174 SYNJ2BPP57105 145 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 ERVK-16P61578 105 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 UBE2BP63146 152 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 CCL8P80075 99 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 CXCL6P80162 114 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 C1orf100Q5SVJ3 147 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 CFAP126Q5VTH2 177 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 EBLN2Q6P2I7 272 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 TIFABQ6ZNK6 161 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 GPHB5Q86YW7 130 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 OR5AS1Q8N127 324 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF843Q8N446 348 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 OPRPNQ99935 248 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-203ENST00000414174 CYTL1Q9NRR1 136 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 IL36RNQ9UBH0 155 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF835Q9Y2P0 537 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 F11RQ9Y624 299 aaKnown RBP2.7□□□□□ -1.98
SF3B1-203ENST00000414174 ANK1P16157 1881 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 SCN10AQ9Y5Y9 1956 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 COL24A1Q17RW2 1714 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 CHD2O14647 1828 aaKnown RBP2.7□□□□□ -1.98
SF3B1-203ENST00000414174 CDC42BPGQ6DT37 1551 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 LOXHD1Q8IVV2 1947 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 ALPK3Q96L96 1907 aa2.7□□□□□ -1.98
SF3B1-203ENST00000414174 FER1L6Q2WGJ9 1857 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 NLRC5Q86WI3 1866 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 ATP7AQ04656 1500 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 MON2Q7Z3U7 1717 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 PEAK1Q9H792 1746 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 TRBV6-7A0A0A0MS04 114 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 TRAV14DV4A0A0A6YYC5 116 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 UBE2L5PA0A1B0GUS4 154 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 BUB1B-PAK6H3BSN5 160 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 NUPR1O60356 82 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 ZNF324O75467 553 aaPredicted RBP2.69□□□□□ -1.98
SF3B1-203ENST00000414174 LTAP01374 205 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 C1QAP02745 245 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 FRMD6-AS1P0C7T7 363 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 SCGB1C2P0DMR2 95 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 HIST1H4AP62805 103 aaKnown RBP2.69□□□□□ -1.98
SF3B1-203ENST00000414174 UBE2L3P68036 154 aaKnown RBP2.69□□□□□ -1.98
SF3B1-203ENST00000414174 CCL20P78556 96 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 FUT5Q11128 374 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 Q6ZQT7 251 aa2.69□□□□□ -1.98
SF3B1-203ENST00000414174 TMEM136Q6ZRR5 245 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms