RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 TMEM14CQ9P0S9 112 aa11.88□□□□□ -0.51
TTC39A-208ENST00000413473 LAMTOR2Q9Y2Q5 125 aa11.88□□□□□ -0.51
TTC39A-208ENST00000413473 SOX21Q9Y651 276 aaPredicted RBP11.88□□□□□ -0.51
TTC39A-208ENST00000413473 IGLV2-11P01706 119 aa11.87□□□□□ -0.51
TTC39A-208ENST00000413473 STPG4Q8N801 248 aa11.87□□□□□ -0.51
TTC39A-208ENST00000413473 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
TTC39A-208ENST00000413473 GFRA4Q9GZZ7 299 aa11.87□□□□□ -0.51
TTC39A-208ENST00000413473 DCHS2Q6V1P9 2916 aa11.87□□□□□ -0.51
TTC39A-208ENST00000413473 TRAV9-2A0A087WT02 112 aa11.87□□□□□ -0.51
TTC39A-208ENST00000413473 PRB4P10163 310 aaPredicted RBP11.87□□□□□ -0.51
TTC39A-208ENST00000413473 LDLRAD2Q5SZI1 272 aa11.87□□□□□ -0.51
TTC39A-208ENST00000413473 SPATA12Q7Z6I5 190 aa11.87□□□□□ -0.51
TTC39A-208ENST00000413473 MUC15Q8N387 334 aa11.87□□□□□ -0.51
TTC39A-208ENST00000413473 NPIPB6E9PJ23 425 aa11.86□□□□□ -0.51
TTC39A-208ENST00000413473 GAGE1Q13065 139 aa11.86□□□□□ -0.51
TTC39A-208ENST00000413473 C17orf77Q96MU5 243 aa11.86□□□□□ -0.51
TTC39A-208ENST00000413473 LY6LH3BQJ8 138 aa11.86□□□□□ -0.51
TTC39A-208ENST00000413473 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
TTC39A-208ENST00000413473 K7EIM0 57 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 CHEK1O14757 476 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 TIMM23O14925 209 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 IGLL1P15814 213 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 TSPOP30536 169 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 ASCL2Q99929 193 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 TMEM70Q9BUB7 260 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 CSMD1Q96PZ7 3565 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 FAM120AOSQ5T036 256 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 FAM162BQ5T6X4 162 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 IGFBPL1Q8WX77 278 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 RNF5Q99942 180 aa11.85□□□□□ -0.51
TTC39A-208ENST00000413473 MED13LQ71F56 2210 aa11.84□□□□□ -0.51
TTC39A-208ENST00000413473 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
TTC39A-208ENST00000413473 TRBV19A0A075B6N1 114 aa11.84□□□□□ -0.51
TTC39A-208ENST00000413473 LOC102724200A0A096LPH7 203 aaPredicted RBP11.84□□□□□ -0.51
TTC39A-208ENST00000413473 HOXB4P17483 251 aaPredicted RBP11.84□□□□□ -0.51
TTC39A-208ENST00000413473 LINC00173Q6ZV60 143 aa11.84□□□□□ -0.51
TTC39A-208ENST00000413473 BPIFA4PQ86YQ2 179 aa11.84□□□□□ -0.51
TTC39A-208ENST00000413473 VKORC1Q9BQB6 163 aa11.84□□□□□ -0.51
TTC39A-208ENST00000413473 SHANK2-AS3Q9BTD1 123 aa11.84□□□□□ -0.51
TTC39A-208ENST00000413473 SCNM1Q9BWG6 230 aa11.84□□□□□ -0.51
TTC39A-208ENST00000413473 IGHV1-24A0A0C4DH33 117 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 LINC00614P0C842 121 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 ZNF672Q499Z4 452 aaPredicted RBP11.83□□□□□ -0.52
TTC39A-208ENST00000413473 CHCHD1Q96BP2 118 aaKnown RBP11.83□□□□□ -0.52
TTC39A-208ENST00000413473 ZFP30Q9Y2G7 519 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 HILPDAQ9Y5L2 63 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 LY6HO94772 140 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 APOHP02749 345 aaPredicted RBP11.83□□□□□ -0.52
TTC39A-208ENST00000413473 ZNF138P52744 262 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 KLF17Q5JT82 389 aaPredicted RBP11.83□□□□□ -0.52
TTC39A-208ENST00000413473 ZNF491Q8N8L2 437 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 ZC2HC1AQ96GY0 325 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 NDFIP1Q9BT67 221 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 S4R3C0 116 aa11.83□□□□□ -0.52
TTC39A-208ENST00000413473 HAX1O00165 279 aa11.82□□□□□ -0.52
TTC39A-208ENST00000413473 NDUFB8O95169 186 aa11.82□□□□□ -0.52
TTC39A-208ENST00000413473 GRNP28799 593 aaKnown RBP11.82□□□□□ -0.52
TTC39A-208ENST00000413473 HINT1P49773 126 aaPredicted RBP11.82□□□□□ -0.52
TTC39A-208ENST00000413473 ARF6P62330 175 aa11.82□□□□□ -0.52
TTC39A-208ENST00000413473 OR4F17Q8NGA8 305 aa11.82□□□□□ -0.52
TTC39A-208ENST00000413473 SIAH2O43255 324 aa11.82□□□□□ -0.52
TTC39A-208ENST00000413473 LEPROTL1O95214 131 aa11.82□□□□□ -0.52
TTC39A-208ENST00000413473 IL4P05112 153 aa11.82□□□□□ -0.52
TTC39A-208ENST00000413473 LIPFP07098 398 aa11.82□□□□□ -0.52
TTC39A-208ENST00000413473 SRSF8Q9BRL6 282 aaKnown RBP11.82□□□□□ -0.52
TTC39A-208ENST00000413473 MRPS16Q9Y3D3 137 aaKnown RBP11.82□□□□□ -0.52
TTC39A-208ENST00000413473 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.81□□□□□ -0.52
TTC39A-208ENST00000413473 C20orf202A1L168 122 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 FAM90A27PA6NNH2 459 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 H3BRN7 92 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 OVOL3O00110 214 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 HTR1DP28221 377 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 FCGR2BP31994 310 aaPredicted RBP11.81□□□□□ -0.52
TTC39A-208ENST00000413473 C16orf54Q6UWD8 224 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 SIGLEC15Q6ZMC9 328 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 RNF125Q96EQ8 232 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 OR4C46A6NHA9 309 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 CRXO43186 299 aaPredicted RBP11.81□□□□□ -0.52
TTC39A-208ENST00000413473 DPM3Q9P2X0 92 aa11.81□□□□□ -0.52
TTC39A-208ENST00000413473 SYS1-DBNDD2H3BUS1 97 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 NBR2O15453 112 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 BCL6BQ8N143 479 aaPredicted RBP11.8□□□□□ -0.52
TTC39A-208ENST00000413473 LY6G5BQ8NDX9 201 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 PSG8Q9UQ74 426 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 RNF24Q9Y225 148 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 TRBV6-1A0A0K0K1D8 114 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 M0R3E3 92 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 HLA-DRB1P01911 266 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 ARMS2P0C7Q2 107 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 TMEM75Q8N9X5 138 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 CSN3P07498 182 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 ZNF414Q96IQ9 312 aa11.8□□□□□ -0.52
TTC39A-208ENST00000413473 A0A1W2PRD5 423 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 A0A1W2PRF3 423 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 A0A1W2PRM7 423 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 CRIP1P50238 77 aa11.79□□□□□ -0.52
TTC39A-208ENST00000413473 CFHR4Q92496 578 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms