RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PRADC1Q9BSG0 188 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 ADAT1Q9BUB4 502 aaKnown RBP1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 TMEM126AQ9H061 195 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 NHP2Q9NX24 153 aaKnown RBP1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 OR5AC2Q9NZP5 309 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 PAIP2BQ9ULR5 123 aaKnown RBP1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 MED31Q9Y3C7 131 aa1.84□□□□□ -2.11
HMGB3P31-201ENST00000413333 SPEF2Q9C093 1822 aa1.84□□□□□ -2.12
HMGB3P31-201ENST00000413333 BRWD1Q9NSI6 2320 aa1.84□□□□□ -2.12
HMGB3P31-201ENST00000413333 COL4A1P02462 1669 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 RIMS1Q86UR5 1692 aaKnown RBP1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 BCL9O00512 1426 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 SOGA1O94964 1423 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 DUXBA0A1W2PPF3 345 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 LINC00587B1AMM8 73 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 S100A1P23297 94 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 SDC4P31431 198 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 RNASE4P34096 147 aaKnown RBP1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 SSR2P43308 183 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 LINC00311Q8N616 119 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 GPX7Q96SL4 187 aaPredicted RBP1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 OR2J1Q9GZK6 312 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 LAMTOR3Q9UHA4 124 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 FER1L6Q2WGJ9 1857 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 SORL1Q92673 2214 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 MED23Q9ULK4 1368 aa1.83□□□□□ -2.12
HMGB3P31-201ENST00000413333 CAMSAP2Q08AD1 1489 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 RIMBP3CA6NJZ7 1639 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 RIMBP3BA6NNM3 1639 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 RIMBP3Q9UFD9 1639 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 TRDV1A0A1B0GX56 115 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 TMEM189A5PLL7 270 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 MIF4GDA9UHW6 222 aaKnown RBP1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 H7BYZ3 331 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 OR2T1O43869 369 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 SULT1C4O75897 302 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 DBIP07108 87 aaKnown RBP1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 MPC1LP0DKB6 136 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 BCL2P10415 239 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 OGNP20774 298 aaKnown RBP1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 MORN2Q502X0 79 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 FKBP1CQ5VVH2 108 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 RPL13AP3Q6NVV1 102 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 PRR15Q8IV56 129 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 PDZD9Q8IXQ8 264 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 SLC30A7Q8NEW0 376 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 YPEL2Q96QA6 119 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 BCL2L10Q9HD36 194 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 COPZ2Q9P299 210 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 HSPB8Q9UJY1 196 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 PCTPQ9UKL6 214 aa1.82□□□□□ -2.12
HMGB3P31-201ENST00000413333 MED12LQ86YW9 2145 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 A0A096LPI6 279 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 A0A1B0GV90 55 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 M0R378 163 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 PROSCO94903 275 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 UBL3O95164 117 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 TRGC2P03986 189 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 SCTP09683 121 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 BAALC-AS2P0C853 105 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 COX4I1P13073 169 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 MIFP14174 115 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 BRS3P32247 399 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 DNAJB13P59910 316 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 UBE2BP63146 152 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 DYNLT1P63172 113 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 ESRGQ1W209 222 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 C10orf55Q5SWW7 151 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 HRCT1Q6UXD1 115 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 SOSTDC1Q6X4U4 206 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 C15orf53Q8NAA6 179 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 TMEM229BQ8NBD8 167 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 REG4Q9BYZ8 158 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 LAMTOR2Q9Y2Q5 125 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 SBF1O95248 1867 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 SCN8AQ9UQD0 1980 aa1.81□□□□□ -2.12
HMGB3P31-201ENST00000413333 PIK3C2AO00443 1686 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 ARHGEF28Q8N1W1 1705 aaKnown RBP1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 N4BP2Q86UW6 1770 aaPredicted RBP1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 CDK5RAP2Q96SN8 1893 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 TRGV10A0A0A0MS01 117 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 IGKV2-29A2NJV5 120 aaPredicted RBP1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 TLCD2A6NGC4 264 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 C5orf58C9J3I9 102 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 NDUFB3O43676 98 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 TNFSF15O95150 251 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 APOC1P02654 83 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 NFYBP25208 207 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 S100A11P31949 105 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 INSL3P51460 131 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 RTL8BQ17RB0 113 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 LINC00301Q8NCQ3 95 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 C1orf54Q8WWF1 131 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 ISOC1Q96CN7 298 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 TEX37Q96LM6 180 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 VPS25Q9BRG1 176 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 C2orf88Q9BSF0 95 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 POPDC3Q9HBV1 291 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 TRAPPC2LQ9UL33 140 aa1.8□□□□□ -2.12
HMGB3P31-201ENST00000413333 OVOS2A0A0G2JMS6 1433 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms