RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 LDLRAD2Q5SZI1 272 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 AMMECR1LQ6DCA0 310 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 LHFPL4Q7Z7J7 247 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 LYPD1Q8N2G4 141 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 RPRMLQ8N4K4 120 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 FER1L6-AS1Q8NA97 138 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 C9orf106Q8NAJ2 232 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 ZNRF1Q8ND25 227 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 MBD3L2Q8NHZ7 208 aaPredicted RBP2.49□□□□□ -2.01
CUL3-204ENST00000409777 C8orf46Q8TAG6 207 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 MAP1LC3CQ9BXW4 147 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 CNFNQ9BYD5 112 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 SIGLEC8Q9NYZ4 499 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 KLK9Q9UKQ9 250 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 ZNF462Q96JM2 2506 aa2.49□□□□□ -2.01
CUL3-204ENST00000409777 GAGE10A6NGK3 116 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 PATE3B3GLJ2 98 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 TMEM238C9JI98 176 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 K7EM74 188 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 K7ERU9 68 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 NCR2O95944 276 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 GNG5P63218 68 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 HSD52Q0P140 79 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 SRSF6Q13247 344 aaKnown RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 EDDM3AQ14507 147 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 DUX4L9Q6RFH8 374 aaPredicted RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 PRSS57Q6UWY2 283 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 TMEM108Q6UXF1 575 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 FOXI2Q6ZQN5 318 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 LINC00305Q7Z4B0 112 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 NUP37Q8NFH4 326 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 OR4X2Q8NGF9 303 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 VSTM2AQ8TAG5 236 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 SARAFQ96BY9 339 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 ZNF48Q96MX3 618 aaPredicted RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 MRPL20Q9BYC9 149 aaKnown RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 KRTAP17-1Q9BYP8 105 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 GCM1Q9NP62 436 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 RNF7Q9UBF6 113 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 WASHC3Q9Y3C0 194 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 TRIOBPQ9H2D6 2365 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 IGHV3OR15-7A0A075B7D8 119 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 A0A1W2PPI3 338 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 WI2-2373I1.2A0A1W2PRP0 233 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 PGPA6NDG6 321 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 C17orf100A8MU93 164 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 P01737 135 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 WT1P19544 449 aaPredicted RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 LGALS7P47929 136 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 CRIP1P50238 77 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 ERHP84090 104 aaKnown RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 RBPJQ06330 500 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 SRSF1Q07955 248 aaKnown RBP eCLIP2.48□□□□□ -2.01
CUL3-204ENST00000409777 ASPHD1Q5U4P2 390 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 TMEM200BQ69YZ2 307 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 ETFRF1Q6IPR1 90 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 BHLHA15Q7RTS1 189 aaPredicted RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 TMEM178AQ8NBL3 297 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 OR5A1Q8NGJ0 315 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 OR10AG1Q8NH19 301 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 LEAP2Q969E1 77 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 Q9H3A6 140 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 SERTAD4Q9NUC0 356 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 INSIG2Q9Y5U4 225 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 A0A087X0K7 114 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 A0A0G2JNJ9 132 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 A0A1B0GWB2 263 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 NPIPB5A8MRT5 1133 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 I3L2K1 104 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 CEACAM4O75871 244 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 IGHV1-46P01743 117 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 PPIAL4GP0DN37 164 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 CAMPP49913 170 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 SUB1P53999 127 aaKnown RBP eCLIP2.48□□□□□ -2.015e-7■■■■■ 33
CUL3-204ENST00000409777 VAMP3Q15836 100 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 ZNF672Q499Z4 452 aaPredicted RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 TIMM23BQ5SRD1 257 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 SIGLEC15Q6ZMC9 328 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 LCNL1Q6ZST4 164 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 Q71RC1 249 aaPredicted RBP2.48□□□□□ -2.01
CUL3-204ENST00000409777 OR4C13Q8NGP0 309 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 TMEM186Q96B77 213 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 ZC2HC1AQ96GY0 325 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 ZNF414Q96IQ9 312 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 DEFB127Q9H1M4 99 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 Q9UFV3 132 aa2.48□□□□□ -2.01
CUL3-204ENST00000409777 TRBV19A0A075B6N1 114 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 IGHV3-64DA0A0J9YX35 117 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 A0A1B0GUT8 65 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 SERTM2A0A1B0GWG4 89 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 hADV38S2A0JD32 116 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 FBLL1A6NHQ2 334 aaKnown RBP2.47□□□□□ -2.01
CUL3-204ENST00000409777 H3BRN7 92 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 PAX4O43316 350 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 APOA2P02652 100 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 SLC25A5P05141 298 aaKnown RBP2.47□□□□□ -2.01
CUL3-204ENST00000409777 CFIP05156 583 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 IGLC6P0CF74 106 aa2.47□□□□□ -2.01
CUL3-204ENST00000409777 CD59P13987 128 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms