RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 RNF182Q8N6D2 247 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 LRBAP50851 2863 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 ZP3P21754 424 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 GPX4P36969 197 aaPredicted RBP9.05□□□□□ -0.96
SNX13-202ENST00000409604 C11orf71Q6IPW1 123 aa9.05□□□□□ -0.96
SNX13-202ENST00000409604 PSMG3Q9BT73 122 aaPredicted RBP9.05□□□□□ -0.96
SNX13-202ENST00000409604 RHPN1-AS1Q9BWJ2 59 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 AVPP01185 164 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 IGLV2-14P01704 120 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 ODF3L1Q8IXM7 274 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 RNASE7Q9H1E1 156 aaKnown RBP9.04□□□□□ -0.96
SNX13-202ENST00000409604 ZNF98A6NK75 572 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 GCGP01275 180 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 RNASE4P34096 147 aaKnown RBP9.04□□□□□ -0.96
SNX13-202ENST00000409604 UQCC3Q6UW78 93 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 C8orf86Q6ZUL3 223 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 ZNF295-AS1Q8N0V1 137 aa9.04□□□□□ -0.96
SNX13-202ENST00000409604 TEX15Q9BXT5 2789 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 RNASEKQ6P5S7 137 aaKnown RBP9.03□□□□□ -0.96
SNX13-202ENST00000409604 ATRAIDQ6UW56 229 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 C10orf99Q6UWK7 81 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 NPIPB5A8MRT5 1133 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 SNURFLB1AK76 121 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 SEC14L6B5MCN3 397 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 PPP1R2P9O14990 202 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 TWIST1Q15672 202 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 USF2Q15853 346 aaPredicted RBP9.03□□□□□ -0.96
SNX13-202ENST00000409604 LINC00311Q8N616 119 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 OR11H6Q8NGC7 330 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 PARD6GQ9BYG4 376 aaPredicted RBP9.03□□□□□ -0.96
SNX13-202ENST00000409604 STAB1Q9NY15 2570 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 IGHV7-81A0A0B4J1V7 117 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 TMEM189A5PLL7 270 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 GZMBP10144 247 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 RPL29P47914 159 aaKnown RBP9.03□□□□□ -0.96
SNX13-202ENST00000409604 BATFQ16520 125 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 PEF1Q9UBV8 284 aaKnown RBP9.03□□□□□ -0.96
SNX13-202ENST00000409604 CDC42EP3Q9UKI2 254 aa9.03□□□□□ -0.96
SNX13-202ENST00000409604 LINC00862A6NCI5 91 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 GGACTQ9BVM4 153 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 SIRPDQ9H106 197 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 VPREB3Q9UKI3 123 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 KMT2EQ8IZD2 1858 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 CPAMD8Q8IZJ3 1885 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 TOMM20LQ6UXN7 152 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 UNC79Q9P2D8 2635 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 HSBP1O75506 76 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
SNX13-202ENST00000409604 FAM71F2Q6NXP2 309 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 C11orf42Q8N5U0 333 aa9.02□□□□□ -0.97
SNX13-202ENST00000409604 LOC102723971A0A1B0GUV8 181 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 PEX7O00628 323 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 RAB9AP51151 201 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 RNF5Q99942 180 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 RNF114Q9Y508 228 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 IGLC7A0M8Q6 106 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 ITGB1BP1O14713 200 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 TCF21O43680 179 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 IGHV4-31P0DP07 118 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 Q8N9W7 124 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 SEC11CQ9BY50 192 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 BRWD1-AS2P59051 145 aa9.01□□□□□ -0.97
SNX13-202ENST00000409604 MRPL36Q9P0J6 103 aaKnown RBP9.01□□□□□ -0.97
SNX13-202ENST00000409604 DEFB1P60022 68 aa9□□□□□ -0.97
SNX13-202ENST00000409604 C12orf54Q6X4T0 127 aa9□□□□□ -0.97
SNX13-202ENST00000409604 SIGLEC15Q6ZMC9 328 aa9□□□□□ -0.97
SNX13-202ENST00000409604 TMEM116Q8NCL8 245 aa9□□□□□ -0.97
SNX13-202ENST00000409604 ITPR2Q14571 2701 aa9□□□□□ -0.97
SNX13-202ENST00000409604 TGIF2-C20orf24A0A0A6YYL0 155 aa9□□□□□ -0.97
SNX13-202ENST00000409604 HLA-DMBP28068 263 aa9□□□□□ -0.97
SNX13-202ENST00000409604 ATP5IP56385 69 aaPredicted RBP9□□□□□ -0.97
SNX13-202ENST00000409604 KRTDAPP60985 99 aa9□□□□□ -0.97
SNX13-202ENST00000409604 RAX2Q96IS3 184 aa9□□□□□ -0.97
SNX13-202ENST00000409604 PHLDA3Q9Y5J5 127 aa9□□□□□ -0.97
SNX13-202ENST00000409604 ZNF253O75346 499 aa9□□□□□ -0.97
SNX13-202ENST00000409604 S100A12P80511 92 aa9□□□□□ -0.97
SNX13-202ENST00000409604 ERCC8Q13216 396 aa9□□□□□ -0.97
SNX13-202ENST00000409604 MRPL32Q9BYC8 188 aaKnown RBP9□□□□□ -0.97
SNX13-202ENST00000409604 CGB3P0DN86 165 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 CGB7P0DN87 165 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 PVRIGQ6DKI7 326 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 Q6ZS46 218 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 C17orf77Q96MU5 243 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 LINC01587Q99440 93 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 SLURP1P55000 103 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 RRN3P1Q2M238 152 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 FAM159AQ6UWV7 190 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 PEMTQ9UBM1 199 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 IGKV3OR2-268A0A0C4DH90 116 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 J3QLI3 93 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 SRP19P09132 144 aaKnown RBP8.99□□□□□ -0.97
SNX13-202ENST00000409604 DEFB131AP59861 70 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 SNRPEP62304 92 aaKnown RBP8.99□□□□□ -0.97
SNX13-202ENST00000409604 OR1N2Q8NGR9 330 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 PRDM13Q9H4Q3 707 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 NCOR1P1Q9H4R4 102 aa8.99□□□□□ -0.97
SNX13-202ENST00000409604 F6UB75 175 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms