RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 PEX7O00628 323 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 IL6RP08887 468 aaPredicted RBP5.98□□□□□ -1.45
SCN9A-202ENST00000409435 SAA1P0DJI8 122 aaPredicted RBP5.98□□□□□ -1.45
SCN9A-202ENST00000409435 CGB7P0DN87 165 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 FOXG1P55316 489 aaPredicted RBP5.98□□□□□ -1.45
SCN9A-202ENST00000409435 SYNJ2BPP57105 145 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 NPCDR1Q9BY65 106 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 VWA8A3KMH1 1905 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 SOCS3O14543 225 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 EGR4Q05215 589 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 FAM74A4Q5TZK3 123 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 SHISA9B4DS77 424 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 HMGA2P52926 109 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 DAD1P61803 113 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 FAM219BQ5XKK7 198 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 HEPN1Q6WQI6 88 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 LIME1Q9H400 295 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 K7EP13 123 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 CCL24O00175 119 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 IGHV4-59P01825 116 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 RND2P52198 227 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 MSRB3Q8IXL7 192 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 OR51G1Q8NGK1 321 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 GNB1LQ9BYB4 327 aa5.98□□□□□ -1.45
SCN9A-202ENST00000409435 TRAV8-3A0A0A6YYJ7 113 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 HGFACQ04756 655 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 IRF3Q14653 427 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 GATAD1Q8WUU5 269 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 MUC21A0A0G2JKD1 596 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 MUC21A0A140T8X8 626 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 NDUFB8O95169 186 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 CD1AP06126 327 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 MUC21Q5SSG8 566 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 LYPD2Q6UXB3 125 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 CHAC1Q9BUX1 264 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 UBL5Q9BZL1 73 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 FAM208BQ5VWN6 2430 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 FAM223BA6NKX1 122 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 CD8AP01732 235 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 NPSP0C0P6 89 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 IFI27P40305 119 aaPredicted RBP5.97□□□□□ -1.45
SCN9A-202ENST00000409435 EFNB2P52799 333 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 SRSF1Q07955 248 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCN9A-202ENST00000409435 KLF17Q5JT82 389 aaPredicted RBP5.97□□□□□ -1.45
SCN9A-202ENST00000409435 FAM223AQ8IWN6 122 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 ASCL2Q99929 193 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 ZNF688P0C7X2 276 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 MST1LQ2TV78 715 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 RNF183Q96D59 192 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 U3KQE9 123 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 ELANEP08246 267 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 FBXL19-AS1Q494R0 122 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 ORMDL2Q53FV1 153 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 RPL39P5Q59GN2 51 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 IFI27L1Q96BM0 104 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 SMIM8Q96KF7 97 aa5.97□□□□□ -1.45
SCN9A-202ENST00000409435 LTBP2Q14767 1821 aa5.96□□□□□ -1.45
SCN9A-202ENST00000409435 A0A087X0K7 114 aa5.96□□□□□ -1.45
SCN9A-202ENST00000409435 GNG5P63218 68 aa5.96□□□□□ -1.45
SCN9A-202ENST00000409435 ATP5L2Q7Z4Y8 100 aa5.96□□□□□ -1.45
SCN9A-202ENST00000409435 FMC1Q96HJ9 113 aa5.96□□□□□ -1.45
SCN9A-202ENST00000409435 PCM1Q15154 2024 aa5.96□□□□□ -1.45
SCN9A-202ENST00000409435 TRAV24A0A0B4J272 114 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 NPC2P61916 151 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 GUSBP1Q15486 140 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 PPBPP02775 128 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 GP9P14770 177 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 PRSS53Q2L4Q9 553 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 PYY3Q5JQD4 70 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 SRRM5B3KS81 715 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 K7EP34 96 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 HLA-DQB1P01920 261 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 SELLP14151 372 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 H2BFSP57053 126 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 CIARTQ8N365 385 aaPredicted RBP5.96□□□□□ -1.46
SCN9A-202ENST00000409435 PLEKHB2Q96CS7 222 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 TMEM243Q9BU79 118 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 SPANXB1Q9NS25 103 aaPredicted RBP5.96□□□□□ -1.46
SCN9A-202ENST00000409435 FAM231BA6NCW3 169 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 DNAJC9-AS1A6NH13 148 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 A8MWP6 167 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 F5H768 121 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 CRLF1O75462 422 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 TBX6O95947 436 aaPredicted RBP5.96□□□□□ -1.46
SCN9A-202ENST00000409435 IGHV4-31P0DP07 118 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 VSIG8P0DPA2 414 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 RPL23P62829 140 aaKnown RBP5.96□□□□□ -1.46
SCN9A-202ENST00000409435 ZNF664Q8N3J9 261 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 RCHY1Q96PM5 261 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 TMEM242Q9NWH2 141 aa5.96□□□□□ -1.46
SCN9A-202ENST00000409435 IGHV1-3A0A0C4DH29 117 aa5.95□□□□□ -1.46
SCN9A-202ENST00000409435 C9orf118A6NHY6 69 aa5.95□□□□□ -1.46
SCN9A-202ENST00000409435 F8WEM9 126 aa5.95□□□□□ -1.46
SCN9A-202ENST00000409435 BUB1B-PAK6H3BSN5 160 aa5.95□□□□□ -1.46
SCN9A-202ENST00000409435 TMEM187Q14656 261 aa5.95□□□□□ -1.46
SCN9A-202ENST00000409435 PRR31Q5SQ13 230 aa5.95□□□□□ -1.46
SCN9A-202ENST00000409435 MDC1Q14676 2089 aaKnown RBP5.95□□□□□ -1.46
SCN9A-202ENST00000409435 A0A1W2PRE2 83 aa5.95□□□□□ -1.46
SCN9A-202ENST00000409435 FAM89BQ8N5H3 189 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms