RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 PSG1P11464 419 aa9.08□□□□□ -0.96
SKA3-203ENST00000400018 PPIFP30405 207 aaKnown RBP9.08□□□□□ -0.96
SKA3-203ENST00000400018 ADMP35318 185 aa9.08□□□□□ -0.96
SKA3-203ENST00000400018 SUB1P53999 127 aaKnown RBP eCLIP9.08□□□□□ -0.96
SKA3-203ENST00000400018 C9orf139Q6ZV77 190 aa9.08□□□□□ -0.96
SKA3-203ENST00000400018 MIR17HGQ75NE6 70 aa9.08□□□□□ -0.96
SKA3-203ENST00000400018 OR1B1Q8NGR6 318 aa9.08□□□□□ -0.96
SKA3-203ENST00000400018 RCC1LQ96I51 464 aaKnown RBP9.08□□□□□ -0.96
SKA3-203ENST00000400018 CCDC140Q96MF4 163 aa9.08□□□□□ -0.96
SKA3-203ENST00000400018 CCL25O15444 150 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 CIDEAO60543 219 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 CRYGCP07315 174 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 LYZP61626 148 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 VWC2Q2TAL6 325 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 C1orf194Q5T5A4 169 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 ZNF709Q8N972 641 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 OR10G4Q8NGN3 311 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 OR10G9Q8NGN4 311 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 OR10G7Q8NGN6 311 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 OR1L6Q8NGR2 347 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 SCGB1D1O95968 90 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 UBE2G2P60604 165 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 PATE2Q6UY27 113 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 COMMD1Q8N668 190 aa9.07□□□□□ -0.96
SKA3-203ENST00000400018 C20orf202A1L168 122 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 GNG7O60262 68 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 IGLC1P0CG04 106 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 IQCJQ1A5X6 159 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 TMEM144Q7Z5S9 345 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 MRPL41Q8IXM3 137 aaKnown RBP9.06□□□□□ -0.96
SKA3-203ENST00000400018 SERTAD4Q9NUC0 356 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 ZFP30Q9Y2G7 519 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 A0A087WWC5 75 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 NPIPB5A8MRT5 1133 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 PMS2P11Q13670 270 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 OR4X1Q8NH49 305 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 FAM110DQ8TAY7 271 aaPredicted RBP9.06□□□□□ -0.96
SKA3-203ENST00000400018 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 SLC45A2Q9UMX9 530 aa9.06□□□□□ -0.96
SKA3-203ENST00000400018 IGKV3-7A0A075B6H7 116 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 APOHP02749 345 aaPredicted RBP9.05□□□□□ -0.96
SKA3-203ENST00000400018 SEC11BP0C7V7 166 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 PYYP10082 97 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 TCTEX1D4Q5JR98 221 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 CENPVQ7Z7K6 275 aaPredicted RBP9.05□□□□□ -0.96
SKA3-203ENST00000400018 OR51G1Q8NGK1 321 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 ZNF414Q96IQ9 312 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 SLC39A9Q9NUM3 307 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 PKD1L1Q8TDX9 2849 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 KIR2DL5BA0A0G2JN68 375 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 KIR2DL5BA0A0G2JPC4 375 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 XKRY2A2RUG3 117 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 C19orf54Q5BKX5 351 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 SPSB3Q6PJ21 355 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 UNQ9165/PRO28630Q6UXU0 137 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 CYP2G1PQ6ZSU1 146 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 KIR2DL5AQ8N109 375 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 NUDT10Q8NFP7 164 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 ASCL2Q99929 193 aa9.05□□□□□ -0.96
SKA3-203ENST00000400018 IL4P05112 153 aa9.04□□□□□ -0.96
SKA3-203ENST00000400018 CTSGP08311 255 aa9.04□□□□□ -0.96
SKA3-203ENST00000400018 RAB9AP51151 201 aa9.04□□□□□ -0.96
SKA3-203ENST00000400018 RPL15P61313 204 aaKnown RBP9.04□□□□□ -0.96
SKA3-203ENST00000400018 IGFL4Q6B9Z1 124 aa9.04□□□□□ -0.96
SKA3-203ENST00000400018 ZNF114Q8NC26 417 aa9.04□□□□□ -0.96
SKA3-203ENST00000400018 ATP6V1FQ16864 119 aa9.04□□□□□ -0.96
SKA3-203ENST00000400018 PRSS22Q9GZN4 317 aa9.04□□□□□ -0.96
SKA3-203ENST00000400018 NPFFR1Q9GZQ6 430 aa9.04□□□□□ -0.96
SKA3-203ENST00000400018 HSBP1L1C9JCN9 74 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 TMEM238C9JI98 176 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 INS-IGF2F8WCM5 200 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 IGF1P05019 195 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 PRR20EP86478 221 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 PRR20CP86479 221 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 PRR20DP86480 221 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 PRR20BP86481 221 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 PRR20AP86496 221 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 GNPNAT1Q96EK6 184 aaPredicted RBP9.03□□□□□ -0.96
SKA3-203ENST00000400018 GNG13Q9P2W3 67 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 TCRBV4S1A1TA0A5B7 111 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 SELENOTP62341 195 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 CYB561D1Q8N8Q1 229 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 TMEM116Q8NCL8 245 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 TVP23CQ96ET8 276 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 C17orf77Q96MU5 243 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 CDC42EP3Q9UKI2 254 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 TRBV9A0A0B4J1U6 114 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 ZNF320A2RRD8 509 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 PSMB11A5LHX3 300 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 ZNF705FA8MVS1 300 aaPredicted RBP9.03□□□□□ -0.96
SKA3-203ENST00000400018 M0QZ24 198 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 ZNF705DP0CH99 300 aaPredicted RBP9.03□□□□□ -0.96
SKA3-203ENST00000400018 ZNF705BP0CI00 300 aaPredicted RBP9.03□□□□□ -0.96
SKA3-203ENST00000400018 ARL14EPLP0DKL9 152 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 TDRG1Q3Y452 100 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 SMIM15Q7Z3B0 74 aa9.03□□□□□ -0.96
SKA3-203ENST00000400018 KLHDC1Q8N7A1 406 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms