RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CADP27708 2225 aa9.04□□□□□ -0.96
CACNA1C-216ENST00000399638 NXPH4O95158 308 aa9.04□□□□□ -0.96
CACNA1C-216ENST00000399638 GATA2P23769 480 aaPredicted RBP9.04□□□□□ -0.96
CACNA1C-216ENST00000399638 PFN2P35080 140 aa9.04□□□□□ -0.96
CACNA1C-216ENST00000399638 SCN2AQ99250 2005 aa9.04□□□□□ -0.96
CACNA1C-216ENST00000399638 FAM90A26D6RGX4 464 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 FOXL1Q12952 345 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 CTHRC1Q96CG8 243 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 USMG5Q96IX5 58 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 PSME4Q14997 1843 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 GAGE12BA1L429 117 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 C17orf98A8MV24 154 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 TMEM178BH3BS89 294 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 GAGE7O76087 117 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 GAGE12FP0CL80 117 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 GAGE12GP0CL81 117 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 GAGE12IP0CL82 117 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 TMEM200BQ69YZ2 307 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 NABP1Q96AH0 204 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 IGF2BP2-AS1Q96M15 143 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 MRPS18CQ9Y3D5 142 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 SDK2Q58EX2 2172 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 SRRM4A7MD48 611 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 MPV17L2Q567V2 206 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
CACNA1C-216ENST00000399638 M0R1W7 72 aa9.02□□□□□ -0.96
CACNA1C-216ENST00000399638 IGHMP01871 453 aa9.02□□□□□ -0.96
CACNA1C-216ENST00000399638 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.96
CACNA1C-216ENST00000399638 SMIM2Q9BVW6 85 aa9.02□□□□□ -0.96
CACNA1C-216ENST00000399638 TMEM242Q9NWH2 141 aa9.02□□□□□ -0.96
CACNA1C-216ENST00000399638 GBF1Q92538 1859 aa9.02□□□□□ -0.96
CACNA1C-216ENST00000399638 C4orf51C9J302 202 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 PLA2G5P39877 138 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 GATAD1Q8WUU5 269 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 SPTBP11277 2137 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 FAM223BA6NKX1 122 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 CGAP01215 116 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 C9orf66Q5T8R8 295 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 FAM223AQ8IWN6 122 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 ABCA7Q8IZY2 2146 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 TMEM14DPA8MWL7 114 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 F8W735 103 aaPredicted RBP9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 CIARTQ8N365 385 aaPredicted RBP9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 MGST2Q99735 147 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 FAM90A9PA6NNJ1 464 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 Q8NFD4 153 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 J3QLI3 93 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 NBL1P41271 181 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 GAGE13Q4V321 117 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 LINC00114Q6XXX2 140 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 Q96M66 194 aa9.02□□□□□ -0.97
CACNA1C-216ENST00000399638 IGHV3-16A0A0C4DH30 117 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 NTN3O00634 580 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 IGHV4OR15-8A0A075B7B6 117 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 A0A087WW49 117 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 SMIM10L1P0DMW3 83 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 UBE2E1P51965 193 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 SAMD5Q5TGI4 173 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 SMIM10Q96HG1 83 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 MMP23AO75900 390 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 PLNP26678 52 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 TSSC4Q9Y5U2 329 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 IGHV1-3A0A0C4DH29 117 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 A0A0J9YY99 117 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 SCO2A0A1W2PP80 73 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 LEPROTO15243 131 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 MST1P26927 711 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 MORN3Q6PF18 240 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 OTORQ9NRC9 128 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 TRACP01848 142 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 IGHV1-8P0DP01 117 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 EGR2P11161 476 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 CCL18P55774 89 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 ATP5IP56385 69 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 C5orf66Q9H5L9 145 aa9.01□□□□□ -0.97
CACNA1C-216ENST00000399638 NOTCH2Q04721 2471 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
CACNA1C-216ENST00000399638 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
CACNA1C-216ENST00000399638 ATP6V0BQ99437 205 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 UPK2O00526 184 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 IGLV3-21P80748 117 aaPredicted RBP9□□□□□ -0.97
CACNA1C-216ENST00000399638 ZSWIM8A7E2V4 1837 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 OVOL3O00110 214 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 IGHV1-69P01742 117 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 ACYP1P07311 99 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 RHPN1-AS1Q9BWJ2 59 aa9□□□□□ -0.97
CACNA1C-216ENST00000399638 IGLV3-19P01714 112 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 LYL1P12980 280 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 CRYGSP22914 178 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 CDKN1BP46527 198 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 SPXQ9BT56 116 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 IGKCP01834 107 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 XIRP1Q702N8 1843 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 TRAV9-1A0A075B6T8 112 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 RND3P61587 244 aa8.99□□□□□ -0.97
CACNA1C-216ENST00000399638 CACNG8Q8WXS5 425 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms