RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 ZFP36P26651 326 aaKnown RBP11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 DDTP30046 118 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 DMRTC2Q8IXT2 367 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 CSRP3P50461 194 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 GGACTQ9BVM4 153 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 CMC4P56277 68 aaPredicted RBP11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 FOXL1Q12952 345 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 DIAPH2-AS1Q14236 149 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 TRAV8-1A0A0A6YYK1 113 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 SMKR1H3BMG3 65 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 ZNF503-AS2A6NEH8 195 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 LINC00614P0C842 121 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 MST1LQ2TV78 715 aa11.2□□□□□ -0.62
CACNA1C-211ENST00000399617 NR2C2APQ86WQ0 139 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 SRSF2Q01130 221 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 JPT2Q9H910 190 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 PNRC2Q9NPJ4 139 aaKnown RBP11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 CEACAM8P31997 349 aaPredicted RBP11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 UBE2E1P51965 193 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 A0A1B0GWB2 263 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 FAM223BA6NKX1 122 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 PAX4O43316 350 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 NDUFB8O95169 186 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 FAM223AQ8IWN6 122 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 IGF2BP2-AS1Q96M15 143 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 PRTN3P24158 256 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 NMBP08949 121 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 DOCK8Q8NF50 2099 aa11.19□□□□□ -0.62
CACNA1C-211ENST00000399617 C8orf86Q6ZUL3 223 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 FAM215AQ9Y5M1 114 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 EREGO14944 169 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 WFDC1Q9HC57 220 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 CHTOPQ9Y3Y2 248 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 USMG5Q96IX5 58 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 CCL1P22362 96 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 ZNF362Q5T0B9 420 aaPredicted RBP11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 GREB1LQ9C091 1923 aaPredicted RBP11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 ESPL1Q14674 2120 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 RALGAPA2Q2PPJ7 1873 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 ATP5IP56385 69 aaPredicted RBP11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 SH2D1AO60880 128 aa11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 ZNF625Q96I27 306 aaPredicted RBP11.18□□□□□ -0.62
CACNA1C-211ENST00000399617 Q6P435 159 aa11.17□□□□□ -0.62
CACNA1C-211ENST00000399617 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
CACNA1C-211ENST00000399617 C6orf226Q5I0X4 101 aa11.17□□□□□ -0.62
CACNA1C-211ENST00000399617 GFI1Q99684 422 aa11.17□□□□□ -0.62
CACNA1C-211ENST00000399617 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.62
CACNA1C-211ENST00000399617 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
CACNA1C-211ENST00000399617 IZUMO1RA6ND01 250 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 NAPSAO96009 420 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 FBLIM1Q8WUP2 373 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 IGKV1OR2-108A0A075B7D4 117 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 AZU1P20160 251 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 GAGE6Q13070 117 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 TREML4Q6UXN2 200 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 MGST2Q99735 147 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 DERL1Q9BUN8 251 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 CYSLTR1Q9Y271 337 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 IGHV4-61A0A0C4DH41 118 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 DEFB4AO15263 64 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 PAX2Q02962 417 aa11.16□□□□□ -0.62
CACNA1C-211ENST00000399617 ADMP35318 185 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 APRG1Q8IVJ8 170 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 ANAPC13Q9BS18 74 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 ANK1P16157 1881 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 DTX1Q86Y01 620 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 ASPHD1Q5U4P2 390 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 MED12Q93074 2177 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 APOC4P55056 127 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 Q6ZR03 302 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 GLRX5Q86SX6 157 aa11.15□□□□□ -0.62
CACNA1C-211ENST00000399617 ZNF138P52744 262 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 DLX4Q92988 240 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 SDHCQ99643 169 aaPredicted RBP11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 GATA3P23771 443 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 PLA2G5P39877 138 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 SLURP1P55000 103 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 CTAG1AP78358 180 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 OCC1Q8TAD7 63 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 PROK2Q9HC23 129 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 SPRNQ5BIV9 151 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 CSTL1Q9H114 145 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 CCL20P78556 96 aa11.14□□□□□ -0.63
CACNA1C-211ENST00000399617 TRAV8-2A0A0B4J237 113 aa11.13□□□□□ -0.63
CACNA1C-211ENST00000399617 ZNF561-AS1K7EIQ3 104 aa11.13□□□□□ -0.63
CACNA1C-211ENST00000399617 SRSF3P84103 164 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-211ENST00000399617 IGFL3Q6UXB1 125 aa11.13□□□□□ -0.63
CACNA1C-211ENST00000399617 CLDN16Q9Y5I7 305 aa11.13□□□□□ -0.63
CACNA1C-211ENST00000399617 IGKV1-5P01602 117 aa11.13□□□□□ -0.63
CACNA1C-211ENST00000399617 Q6ZQT7 251 aa11.13□□□□□ -0.63
CACNA1C-211ENST00000399617 NIT1Q86X76 327 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms