RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OR10X1Q8NGY0 326 aa7.92□□□□□ -1.14
PTCHD4-202ENST00000398738 TCRBV4S1A1TA0A5B7 111 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 PSMB11A5LHX3 300 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 TMEM11P17152 192 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 C2orf91Q6ZV80 131 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 ADTRPQ96IZ2 230 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 C18orf15Q96N68 181 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 TTTY13Q9BZ97 58 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 DMXL1Q9Y485 3027 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 PTPRBP23467 1997 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 CACNG7P62955 275 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 FAM162BQ5T6X4 162 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 CLEC2AQ6UVW9 174 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 PET117Q6UWS5 81 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 ATP5L2Q7Z4Y8 100 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 NEU4Q8WWR8 484 aaPredicted RBP7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 RITA1Q96K30 269 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 S4R3C0 116 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 SRSF6Q13247 344 aaKnown RBP7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 OR10AG1Q8NH19 301 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 PERPQ96FX8 193 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 NDUFA4L2Q9NRX3 87 aa7.91□□□□□ -1.14
PTCHD4-202ENST00000398738 IGKV1D-37A0A075B6S9 117 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 LAMTOR5O43504 91 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 TCRAP04437 139 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 COX8AP10176 69 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 MEF2CQ06413 473 aaPredicted RBP7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 C3orf36Q3SXR2 165 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 C1orf185Q5T7R7 199 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 GTF2H5Q6ZYL4 71 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 MDS2Q8NDY4 140 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 OR2K2Q8NGT1 345 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 OR4A5Q8NH83 315 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 SMIM12Q96EX1 92 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 A0A0G2JLM5 398 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 SMKR1H3BMG3 65 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 CRXO43186 299 aaPredicted RBP7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 TNFAIP6P98066 277 aaPredicted RBP7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 Q5PR19 223 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 C5orf17Q8NAS9 161 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 C17orf77Q96MU5 243 aa7.9□□□□□ -1.14
PTCHD4-202ENST00000398738 RBP4P02753 201 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 GCSHP23434 173 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 CSN1S1P47710 185 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 PLP1P60201 277 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 CACNG8Q8WXS5 425 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 ZNF714Q96N38 554 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 ZNF747Q9BV97 191 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 GTSF1LQ9H1H1 148 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 SPCS1Q9Y6A9 102 aa7.9□□□□□ -1.15
PTCHD4-202ENST00000398738 FNDC10F2Z333 226 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 CGB3P0DN86 165 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 CGB7P0DN87 165 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 SUB1P53999 127 aaKnown RBP eCLIP7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 UBALD2Q8IYN6 164 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 MTURNQ8N3F0 131 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 RNF7Q9UBF6 113 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 PIEZO2Q9H5I5 2752 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 A0A1B0GUT8 65 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 MZT1Q08AG7 82 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 C22orf34Q6ZV56 151 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 TMEM178AQ8NBL3 297 aa7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 RPUSD1Q9UJJ7 312 aaKnown RBP7.89□□□□□ -1.15
PTCHD4-202ENST00000398738 NBASA2RRP1 2371 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 A0A1W2PPI3 338 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 TMEM213A2RRL7 107 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 M0R3E3 92 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 TNFRSF1AP19438 455 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 PAX2Q02962 417 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 SMAGPQ0VAQ4 97 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 TIMM23BQ5SRD1 257 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 FAM222BQ8WU58 562 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 FER1L6-AS2Q96M78 137 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 MLST8Q9BVC4 326 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 C1RLQ9NZP8 487 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 A1L4Q6 167 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 A6NDN8 102 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 D6R8Y8 96 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 K7ERJ3 54 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 LINC01545Q5VT33 79 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 SLC25A48Q6ZT89 311 aaKnown RBP7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 AMN1Q8IY45 258 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 ARRDC1-AS1Q9H2J1 176 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 MS4A6AQ9H2W1 248 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 CGB1A6NKQ9 187 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 NKX2-8O15522 239 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 IGLV1-40P01703 118 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 SP9P0CG40 484 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 CNTFRP26992 372 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 GAFA1Q96PS6 74 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 NDFIP1Q9BT67 221 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 PROCRQ9UNN8 238 aa7.88□□□□□ -1.15
PTCHD4-202ENST00000398738 C9orf118A6NHY6 69 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 WT1P19544 449 aaPredicted RBP7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 POU2AF1Q16633 256 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 RPRMLQ8N4K4 120 aa7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.87□□□□□ -1.15
PTCHD4-202ENST00000398738 PRSS22Q9GZN4 317 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms