RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CTXND1A0A1B0GTU2 59 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 OR11H12B2RN74 326 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 YIF1AO95070 293 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 SNAPINO95295 136 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 RPL29P47914 159 aaKnown RBP10.93□□□□□ -0.66
SEC13-208ENST00000397109 OR10G4Q8NGN3 311 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
SEC13-208ENST00000397109 SLC35B3Q9H1N7 401 aa10.93□□□□□ -0.66
SEC13-208ENST00000397109 TSPAN4O14817 238 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 AGPAT2O15120 278 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 IFNA1P01562 189 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 PPT1P50897 306 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 SRSF3P84103 164 aaKnown RBP10.92□□□□□ -0.66
SEC13-208ENST00000397109 HAGHQ16775 308 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 ZNF506Q5JVG8 444 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 FFAR4Q5NUL3 377 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 ETFRF1Q6IPR1 90 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 ZNF600Q6ZNG1 722 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 RPP25LQ8N5L8 163 aaKnown RBP10.92□□□□□ -0.66
SEC13-208ENST00000397109 DEFB125Q8N687 156 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 OR10G9Q8NGN4 311 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 OR10G7Q8NGN6 311 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 OR4X1Q8NH49 305 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 SMPXQ9UHP9 88 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 RFNGQ9Y644 331 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 SELENOKQ9Y6D0 94 aa10.92□□□□□ -0.66
SEC13-208ENST00000397109 TENM3Q9P273 2699 aa10.91□□□□□ -0.66
SEC13-208ENST00000397109 IGHV3OR16-8A0A075B7F1 116 aa10.91□□□□□ -0.66
SEC13-208ENST00000397109 ZNF207O43670 478 aaKnown RBP10.91□□□□□ -0.66
SEC13-208ENST00000397109 SFTA3P0C7M3 94 aa10.91□□□□□ -0.66
SEC13-208ENST00000397109 BMI1P35226 326 aa10.91□□□□□ -0.66
SEC13-208ENST00000397109 TMEM116Q8NCL8 245 aa10.91□□□□□ -0.66
SEC13-208ENST00000397109 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
SEC13-208ENST00000397109 SRD5A3Q9H8P0 318 aa10.91□□□□□ -0.66
SEC13-208ENST00000397109 TRAV30A0A087WSZ9 112 aa10.9□□□□□ -0.66
SEC13-208ENST00000397109 IGHV7-4-1A0A0J9YVY3 117 aa10.9□□□□□ -0.66
SEC13-208ENST00000397109 CLN5O75503 358 aa10.9□□□□□ -0.66
SEC13-208ENST00000397109 AKR1C1Q04828 323 aa10.9□□□□□ -0.66
SEC13-208ENST00000397109 TOMM20LQ6UXN7 152 aa10.9□□□□□ -0.66
SEC13-208ENST00000397109 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.66
SEC13-208ENST00000397109 ZNF414Q96IQ9 312 aa10.9□□□□□ -0.66
SEC13-208ENST00000397109 HUWE1Q7Z6Z7 4374 aaKnown RBP10.9□□□□□ -0.66
SEC13-208ENST00000397109 SMCO3A2RU48 225 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 MAP1LC3B2A6NCE7 125 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 CHEK1O14757 476 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 ADCYAP1P18509 176 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 ZNF726P1Q15940 193 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 SLC35E1Q96K37 410 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 RHPN1-AS1Q9BWJ2 59 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 GGTLC1Q9BX51 225 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 NKX6-2Q9C056 277 aaPredicted RBP10.89□□□□□ -0.67
SEC13-208ENST00000397109 MAP1LC3BQ9GZQ8 125 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 VSIRQ9H7M9 311 aa10.89□□□□□ -0.67
SEC13-208ENST00000397109 MRPL36Q9P0J6 103 aaKnown RBP10.89□□□□□ -0.67
SEC13-208ENST00000397109 PUS1Q9Y606 427 aaKnown RBP eCLIP10.89□□□□□ -0.67
SEC13-208ENST00000397109 OR4C46A6NHA9 309 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 PSMB3P49720 205 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 CCL20P78556 96 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 MLANAQ16655 118 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 SUN5Q8TC36 379 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 MGST2Q99735 147 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 TXNDC17Q9BRA2 123 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 WFDC10AQ9H1F0 79 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 TMEM231Q9H6L2 316 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 MANBALQ9NQG1 85 aa10.88□□□□□ -0.67
SEC13-208ENST00000397109 A0A1W2PPV4 95 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 RBMY1BA6NDE4 496 aaKnown RBP10.87□□□□□ -0.67
SEC13-208ENST00000397109 RBMY1EA6NEQ0 496 aaKnown RBP10.87□□□□□ -0.67
SEC13-208ENST00000397109 RBMY1DP0C7P1 496 aaKnown RBP10.87□□□□□ -0.67
SEC13-208ENST00000397109 CDC34P49427 236 aaPredicted RBP10.87□□□□□ -0.67
SEC13-208ENST00000397109 GAMTQ14353 236 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 FAM110AQ9BQ89 295 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 VAX2Q9UIW0 290 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 PXMP4Q9Y6I8 212 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 LOC102723971A0A1B0GUV8 181 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 BCL2P10415 239 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 RND2P52198 227 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 CMC4P56277 68 aaPredicted RBP10.87□□□□□ -0.67
SEC13-208ENST00000397109 B2MP61769 119 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 SELENOTP62341 195 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 PRR20EP86478 221 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 PRR20CP86479 221 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 PRR20DP86480 221 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 PRR20BP86481 221 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 PRR20AP86496 221 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 SOHLH1Q5JUK2 328 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 LCN15Q6UWW0 184 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 RAB24Q969Q5 203 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 RNF2Q99496 336 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
SEC13-208ENST00000397109 IGHV3-49A0A0A0MS15 119 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 A0A1W2PS18 150 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 C9JQL5 133 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 C3orf84H3BNL1 204 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 IGKV1-17P01599 117 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 SRP19P09132 144 aaKnown RBP10.86□□□□□ -0.67
SEC13-208ENST00000397109 IGLC1P0CG04 106 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 NPPCP23582 126 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 PAFAH1B2P68402 229 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 ICAM4Q14773 271 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms