RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 NFE4Q86UQ8 179 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 SERP2Q8N6R1 65 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 ZNF441Q8N8Z8 693 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 ZPLD1Q8TCW7 415 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 OVCA2Q8WZ82 227 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 ZNF501Q96CX3 271 aaPredicted RBP2.88□□□□□ -1.95
XRCC4-203ENST00000396027 SRSF8Q9BRL6 282 aaKnown RBP2.88□□□□□ -1.95
XRCC4-203ENST00000396027 C1QTNF5Q9BXJ0 243 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 PRRG4Q9BZD6 226 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 ZMAT4Q9H898 229 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 OCIAD1Q9NX40 245 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 ZNF492Q9P255 531 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 C19orf25Q9UFG5 118 aaPredicted RBP2.88□□□□□ -1.95
XRCC4-203ENST00000396027 EPDR1Q9UM22 224 aa2.88□□□□□ -1.95
XRCC4-203ENST00000396027 LCTP09848 1927 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 KIF26BQ2KJY2 2108 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 TRGV11A0A075B6L2 103 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 TRBV19A0A075B6N1 114 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 TRGV5A0A0B4J1U4 118 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 TRBV7-6A0A0J9YX20 115 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 TRBV10-2A0A0K0K1G8 114 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 A0A1B0GWA3 101 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 A0A1W2PRX2 142 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 LINC01553A4QN01 128 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 C15orf62A8K5M9 175 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 NPIPB11E5RHQ5 1161 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 H3BMM0 161 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 M0QZQ0 153 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 LYPD3O95274 346 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 P04436 131 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 INAFM2P0DMQ5 153 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 FKBP2P26885 142 aaKnown RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 SSR2P43308 183 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 CTXN1P60606 82 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 SRSF2Q01130 221 aaKnown RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 CD69Q07108 199 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 CDKN3Q16667 212 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 C4orf26Q17RF5 130 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 Q6ZRU5 148 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 Q6ZSR3 168 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 MRPL55Q7Z7F7 128 aaKnown RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 MARCH3Q86UD3 253 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 MEX3DQ86XN8 651 aaKnown RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 FAM90A1Q86YD7 464 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 SFTPA2Q8IWL1 248 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 SFTPA1Q8IWL2 248 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 ZNF114Q8NC26 417 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 PFN4Q8NHR9 129 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 UBALD1Q8TB05 177 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 UBE2WQ96B02 151 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 CNRIP1Q96F85 164 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 VSIG2Q96IQ7 327 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 S1PR3Q99500 378 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 SHANK2-AS3Q9BTD1 123 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 SPRY4Q9C004 299 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 AAMDCQ9H7C9 122 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 SLC25A22Q9H936 323 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 PLEKHA3Q9HB20 300 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 NXT2Q9NPJ8 142 aaKnown RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 C20orf141Q9NUB4 165 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 WDR83OSQ9Y284 106 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 PYGO1Q9Y3Y4 419 aa2.87□□□□□ -1.95
XRCC4-203ENST00000396027 AMMECR1Q9Y4X0 333 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 NUP210Q8TEM1 1887 aaPredicted RBP2.87□□□□□ -1.95
XRCC4-203ENST00000396027 PLXNB2O15031 1838 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 TRBV6-6A0A0A6YYG2 114 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 A0A1B0GTH9 108 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 FAM236AA0A1B0GUQ0 79 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 FAM236BA0A1B0GV22 79 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 A0A1B0GVT2 93 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 KNCNA6PVL3 124 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 LINC00473A8K010 186 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 HIGD1CA8MV81 97 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 EPM2AB3EWF7 344 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 CCL22O00626 93 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 CDX4O14627 284 aaPredicted RBP2.86□□□□□ -1.95
XRCC4-203ENST00000396027 MGST3O14880 152 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 LYZL6O75951 148 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 CD7P09564 240 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 GP1BBP13224 206 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 NPPCP23582 126 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 UBE2D1P51668 147 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 FXYD2P54710 66 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 RPS18P62269 152 aaKnown RBP2.86□□□□□ -1.95
XRCC4-203ENST00000396027 RPL18Q07020 188 aaKnown RBP2.86□□□□□ -1.95
XRCC4-203ENST00000396027 FHL1Q13642 323 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 KISS1Q15726 138 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 LINC01620Q4KN68 170 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 CENPWQ5EE01 88 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 KHDC1LQ5JSQ8 128 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 PMS2CLQ68D20 193 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 PRR15Q8IV56 129 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 POM121L12Q8N7R1 296 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 C9orf106Q8NAJ2 232 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 OR8A1Q8NGG7 326 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 IL17DQ8TAD2 202 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 NT5CQ8TCD5 201 aa2.86□□□□□ -1.95
XRCC4-203ENST00000396027 SSC4DQ8WTU2 575 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms