RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 TFPI2P48307 235 aa6.9□□□□□ -1.3
CCR9-203ENST00000395963 CNN1P51911 297 aaKnown RBP6.9□□□□□ -1.3
CCR9-203ENST00000395963 SERF2P84101 59 aa6.9□□□□□ -1.3
CCR9-203ENST00000395963 FAM90A2PQ658T7 463 aa6.9□□□□□ -1.3
CCR9-203ENST00000395963 TEPPQ6URK8 271 aa6.9□□□□□ -1.3
CCR9-203ENST00000395963 OR4X2Q8NGF9 303 aa6.9□□□□□ -1.3
CCR9-203ENST00000395963 WIPF2Q8TF74 440 aaPredicted RBP6.9□□□□□ -1.3
CCR9-203ENST00000395963 TRGV9Q99603 122 aa6.9□□□□□ -1.3
CCR9-203ENST00000395963 FAM103A1Q9BTL3 118 aaKnown RBP6.9□□□□□ -1.3
CCR9-203ENST00000395963 WDR61Q9GZS3 305 aaKnown RBP6.9□□□□□ -1.3
CCR9-203ENST00000395963 WFDC1Q9HC57 220 aa6.9□□□□□ -1.3
CCR9-203ENST00000395963 LSM4Q9Y4Z0 139 aaKnown RBP6.9□□□□□ -1.3
CCR9-203ENST00000395963 F6UZH7 168 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 CST7O76096 145 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 MT-CO2P00403 227 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 BCL2P10415 239 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 PTTG1IPP53801 180 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 ELLP55199 621 aaPredicted RBP6.9□□□□□ -1.31
CCR9-203ENST00000395963 FOXL1Q12952 345 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 UBE2V1Q13404 147 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 LINC01551Q86U37 167 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 C19orf24Q9BVV8 132 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 C21orf62Q9NYP8 219 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 RFNGQ9Y644 331 aa6.9□□□□□ -1.31
CCR9-203ENST00000395963 TRAV9-1A0A075B6T8 112 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 CLPSL1A2RUU4 121 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 CYSRT1A8MQ03 144 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 TMEM250H0YL14 139 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 K7EIM0 57 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 MFAP2P55001 183 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 TPPP2P59282 170 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 RUNX1Q01196 453 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 ATP5G2Q06055 141 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 BATFQ16520 125 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 NUDT10Q8NFP7 164 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 OR51G1Q8NGK1 321 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 SMIM12Q96EX1 92 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 UBE2E2Q96LR5 201 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 FBXL7Q9UJT9 491 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 H7BYZ3 331 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 ATP6V0CP27449 155 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 YPEL3P61236 119 aaPredicted RBP6.89□□□□□ -1.31
CCR9-203ENST00000395963 RHOGP84095 191 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 ZNF709Q8N972 641 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 MBD3L1Q8WWY6 194 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 TAF15Q92804 592 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCR9-203ENST00000395963 MS4A10Q96PG2 267 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 RNF2Q99496 336 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 VAMP8Q9BV40 100 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 SLC45A2Q9UMX9 530 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 HIVEP2P31629 2446 aa6.89□□□□□ -1.31
CCR9-203ENST00000395963 G3V318 75 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 TRGV3P03979 118 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 RAB9AP51151 201 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 ARL16Q0P5N6 197 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 TREML4Q6UXN2 200 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 TOMM20LQ6UXN7 152 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 TMEM217Q8N7C4 229 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 ZNF738Q8NE65 137 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 ZNF502Q8TBZ5 544 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.88□□□□□ -1.31
CCR9-203ENST00000395963 TCRBV4S1A1TA0A5B7 111 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 LINC01548A6NM66 108 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 REG1AP05451 166 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 PLP1P60201 277 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 KLHDC1Q8N7A1 406 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 TMEM190Q8WZ59 177 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 FNDC4Q9H6D8 234 aaPredicted RBP6.88□□□□□ -1.31
CCR9-203ENST00000395963 TNFRSF19Q9NS68 423 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 FUT9Q9Y231 359 aa6.88□□□□□ -1.31
CCR9-203ENST00000395963 CCL25O15444 150 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 GALR1P47211 349 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 C15orf32Q32M92 178 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 ACSM6Q6P461 480 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 LINC01006Q8NI28 216 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 ALKBH7Q9BT30 221 aaPredicted RBP6.87□□□□□ -1.31
CCR9-203ENST00000395963 NPCDR1Q9BY65 106 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 ZNF355PQ9NSJ1 428 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 UBE2L5PA0A1B0GUS4 154 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 ZNF705FA8MVS1 300 aaPredicted RBP6.87□□□□□ -1.31
CCR9-203ENST00000395963 GNG7O60262 68 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 OR2J3O76001 311 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 ZNF705DP0CH99 300 aaPredicted RBP6.87□□□□□ -1.31
CCR9-203ENST00000395963 ZNF705BP0CI00 300 aaPredicted RBP6.87□□□□□ -1.31
CCR9-203ENST00000395963 PF4V1P10720 104 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 BMI1P35226 326 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 PROK1P58294 105 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 C16orf54Q6UWD8 224 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 ZNF491Q8N8L2 437 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 TEX15Q9BXT5 2789 aa6.87□□□□□ -1.31
CCR9-203ENST00000395963 SH2D7A6NKC9 451 aaPredicted RBP6.86□□□□□ -1.31
CCR9-203ENST00000395963 NDUFB8O95169 186 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 LGALS1P09382 135 aaKnown RBP6.86□□□□□ -1.31
CCR9-203ENST00000395963 IGLC1P0CG04 106 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 RNF151Q2KHN1 245 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 TMEM41BQ5BJD5 291 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 Q6ZS46 218 aa6.86□□□□□ -1.31
CCR9-203ENST00000395963 Q71RC1 249 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms