RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 RIGQ13278 110 aa5.05□□□□□ -1.6
NXF3-201ENST00000395065 FAM106AQ4KMX7 169 aa5.05□□□□□ -1.6
NXF3-201ENST00000395065 CCDC144NLQ6NUI1 221 aa5.05□□□□□ -1.6
NXF3-201ENST00000395065 PRSS3P2Q8NHM4 247 aa5.05□□□□□ -1.6
NXF3-201ENST00000395065 NPIPB3Q92617 1050 aa5.05□□□□□ -1.6
NXF3-201ENST00000395065 ARRDC1-AS1Q9H2J1 176 aa5.05□□□□□ -1.6
NXF3-201ENST00000395065 SPANXB1Q9NS25 103 aaPredicted RBP5.05□□□□□ -1.6
NXF3-201ENST00000395065 KNTC1P50748 2209 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 DMXL2Q8TDJ6 3036 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 CGB1A6NKQ9 187 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 SHISA9B4DS77 424 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 E7EUB6 86 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 E9PLD3 99 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 J3QR89 54 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 CRYGCP07315 174 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 ARMS2P0C7Q2 107 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 FCGR2BP31994 310 aaPredicted RBP5.04□□□□□ -1.6
NXF3-201ENST00000395065 IFI27P40305 119 aaPredicted RBP5.04□□□□□ -1.6
NXF3-201ENST00000395065 LOXL1Q08397 574 aaPredicted RBP5.04□□□□□ -1.6
NXF3-201ENST00000395065 MZT1Q08AG7 82 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 SCGB2A2Q13296 93 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 ABHD17BQ5VST6 288 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 MBNL2Q5VZF2 373 aaKnown RBP5.04□□□□□ -1.6
NXF3-201ENST00000395065 PVRIGQ6DKI7 326 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 Q86TA4 180 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 PCP2Q8IVA1 136 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 ZNRF1Q8ND25 227 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 OSR1Q8TAX0 266 aaPredicted RBP5.04□□□□□ -1.6
NXF3-201ENST00000395065 TMEM190Q8WZ59 177 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 LEAP2Q969E1 77 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 C18orf15Q96N68 181 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 TM2D2Q9BX73 214 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 Q9H3A6 140 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 ZMAT4Q9H898 229 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 PGPEP1Q9NXJ5 209 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 TSSC4Q9Y5U2 329 aaPredicted RBP5.04□□□□□ -1.6
NXF3-201ENST00000395065 DSPP15924 2871 aaKnown RBP5.04□□□□□ -1.6
NXF3-201ENST00000395065 TANC2Q9HCD6 1990 aa5.04□□□□□ -1.6
NXF3-201ENST00000395065 TPRP12270 2363 aaKnown RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 NKX2-8O15522 239 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 TIMM8AO60220 97 aaPredicted RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 LHBP01229 141 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 THBDP07204 575 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 KIR2DL2P43627 348 aaPredicted RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 RAB9AP51151 201 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 FXYD2P54710 66 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 CACNG7P62955 275 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 WT1-ASQ06250 92 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 SRSF1Q07955 248 aaKnown RBP eCLIP5.03□□□□□ -1.6
NXF3-201ENST00000395065 TMEM30BQ3MIR4 351 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 Q6AWC8 147 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 CIARTQ8N365 385 aaPredicted RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 RBMXL3Q8N7X1 1067 aaKnown RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 TMEM116Q8NCL8 245 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 OR8A1Q8NGG7 326 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 SPAG8Q99932 426 aaPredicted RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 SPRY4Q9C004 299 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 MRPL36Q9P0J6 103 aaKnown RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 CHD6Q8TD26 2715 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 ACACBO00763 2458 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 DSCAMO60469 2012 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 A0A1W2PRD5 423 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 A0A1W2PRF3 423 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 A0A1W2PRM7 423 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 ZNF207O43670 478 aaKnown RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 PLAUP00749 431 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 HBDP02042 147 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 SUB1P53999 127 aaKnown RBP eCLIP5.03□□□□□ -1.6
NXF3-201ENST00000395065 CKS1BP61024 79 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 DHRS13Q6UX07 377 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 BCL6BQ8N143 479 aaPredicted RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 TMEM167AQ8TBQ9 72 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 IFI27L1Q96BM0 104 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 ZNF414Q96IQ9 312 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 FER1L6-AS2Q96M78 137 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 TRGV9Q99603 122 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 OTORQ9NRC9 128 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 HHLA3Q9XRX5 114 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 TIMM8BQ9Y5J9 83 aaPredicted RBP5.03□□□□□ -1.6
NXF3-201ENST00000395065 OTOGLQ3ZCN5 2332 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 BOD1L1Q8NFC6 3051 aa5.03□□□□□ -1.6
NXF3-201ENST00000395065 KMT2BQ9UMN6 2715 aaPredicted RBP5.02□□□□□ -1.61
NXF3-201ENST00000395065 CACNA1GO43497 2377 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 WI2-2373I1.2A0A1W2PRP0 233 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 LINC01546A6NGU7 62 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 HLA-DRB4P13762 266 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 WFDC2Q14508 124 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 TMEM108Q6UXF1 575 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 ZNF788Q6ZQV5 615 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 ZNF833PQ6ZTB9 187 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 S100A7AQ86SG5 101 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 C8orf46Q8TAG6 207 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 MRAP2Q96G30 205 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 ZNF71Q9NQZ8 489 aaPredicted RBP5.02□□□□□ -1.61
NXF3-201ENST00000395065 TMEM14CQ9P0S9 112 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 PRO0461Q9UI25 63 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 RPUSD1Q9UJJ7 312 aaKnown RBP5.02□□□□□ -1.61
NXF3-201ENST00000395065 HLA-DRB4X5D2U9 266 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 CACNA1BQ00975 2339 aa5.02□□□□□ -1.61
NXF3-201ENST00000395065 TRAV26-1A0A087WT03 109 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms