RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 HLA-DQA1P01909 254 aa12.05□□□□□ -0.48
CPSF7-202ENST00000394888 SNHG12Q9BXW3 62 aa12.05□□□□□ -0.48
CPSF7-202ENST00000394888 NPIPB5A8MRT5 1133 aa12.05□□□□□ -0.48
CPSF7-202ENST00000394888 C19orf84I3L1E1 186 aa12.05□□□□□ -0.48
CPSF7-202ENST00000394888 CIARTQ8N365 385 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-202ENST00000394888 LOC105371242A0A075B767 164 aa12.04□□□□□ -0.48
CPSF7-202ENST00000394888 TBL2Q9Y4P3 447 aaKnown RBP12.04□□□□□ -0.48
CPSF7-202ENST00000394888 GPR6P46095 362 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-202ENST00000394888 LYZP61626 148 aa12.04□□□□□ -0.48
CPSF7-202ENST00000394888 C1orf122Q6ZSJ8 110 aa12.04□□□□□ -0.48
CPSF7-202ENST00000394888 TTC9CQ8N5M4 171 aa12.04□□□□□ -0.48
CPSF7-202ENST00000394888 TBX15Q96SF7 602 aa12.04□□□□□ -0.48
CPSF7-202ENST00000394888 OTORQ9NRC9 128 aa12.04□□□□□ -0.48
CPSF7-202ENST00000394888 ZMAT5Q9UDW3 170 aaKnown RBP12.04□□□□□ -0.48
CPSF7-202ENST00000394888 KIR3DL3Q8N743 410 aa12.04□□□□□ -0.48
CPSF7-202ENST00000394888 ZC2HC1AQ96GY0 325 aa12.04□□□□□ -0.48
CPSF7-202ENST00000394888 UCNP55089 124 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 TPPP2P59282 170 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 CT83Q5H943 113 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 PRR27Q6MZM9 219 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 RAB1BQ9H0U4 201 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 SMAD5-AS1Q9Y6J3 95 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 A0A1W2PRD5 423 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 A0A1W2PRF3 423 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 A0A1W2PRM7 423 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 HIST1H1EP10412 219 aaKnown RBP12.03□□□□□ -0.48
CPSF7-202ENST00000394888 RPP21Q9H633 154 aaKnown RBP12.03□□□□□ -0.48
CPSF7-202ENST00000394888 FLNCQ14315 2725 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 NCOR2Q9Y618 2525 aa12.03□□□□□ -0.48
CPSF7-202ENST00000394888 APCSP02743 223 aa12.02□□□□□ -0.48
CPSF7-202ENST00000394888 C20orf144Q9BQM9 153 aa12.02□□□□□ -0.48
CPSF7-202ENST00000394888 NRN1Q9NPD7 142 aa12.02□□□□□ -0.48
CPSF7-202ENST00000394888 SERTAD4Q9NUC0 356 aa12.02□□□□□ -0.48
CPSF7-202ENST00000394888 NBASA2RRP1 2371 aa12.02□□□□□ -0.48
CPSF7-202ENST00000394888 ZNF324O75467 553 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-202ENST00000394888 NEU4Q8WWR8 484 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-202ENST00000394888 IGHV7-81A0A0B4J1V7 117 aa12.02□□□□□ -0.49
CPSF7-202ENST00000394888 SCGB1D1O95968 90 aa12.02□□□□□ -0.49
CPSF7-202ENST00000394888 RAB4AP20338 218 aa12.02□□□□□ -0.49
CPSF7-202ENST00000394888 FOXA3P55318 350 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-202ENST00000394888 FAM19A2Q8N3H0 131 aa12.02□□□□□ -0.49
CPSF7-202ENST00000394888 Q8N9W7 124 aa12.02□□□□□ -0.49
CPSF7-202ENST00000394888 TPRP12270 2363 aaKnown RBP12.02□□□□□ -0.49
CPSF7-202ENST00000394888 ZNF562Q6V9R5 426 aa12.01□□□□□ -0.49
CPSF7-202ENST00000394888 PRORYQ9H606 182 aa12.01□□□□□ -0.49
CPSF7-202ENST00000394888 BRS3P32247 399 aa12.01□□□□□ -0.49
CPSF7-202ENST00000394888 ATP5L2Q7Z4Y8 100 aa12.01□□□□□ -0.49
CPSF7-202ENST00000394888 RASL11BQ9BPW5 248 aa12.01□□□□□ -0.49
CPSF7-202ENST00000394888 COX19Q49B96 90 aa12.01□□□□□ -0.49
CPSF7-202ENST00000394888 GATD1Q8NB37 220 aa12.01□□□□□ -0.49
CPSF7-202ENST00000394888 NDUFB8O95169 186 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 LMO4P61968 165 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 LY6DQ14210 128 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 BAGE3Q86Y29 109 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 VN1R17PQ8TDU5 208 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 RNF125Q96EQ8 232 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 RBM14Q96PK6 669 aaKnown RBP12□□□□□ -0.49
CPSF7-202ENST00000394888 C2orf70A6NJV1 201 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 UQCRFS1P47985 274 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 EBLN2Q6P2I7 272 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 TMEM75Q8N9X5 138 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 TMEM68Q96MH6 324 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 C1RLQ9NZP8 487 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 RPH3ALQ9UNE2 315 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 C3orf79P0CE67 100 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 RNF224P0DH78 156 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 ITLN2Q8WWU7 325 aaPredicted RBP12□□□□□ -0.49
CPSF7-202ENST00000394888 GFRA4Q9GZZ7 299 aa12□□□□□ -0.49
CPSF7-202ENST00000394888 IGSF10Q6WRI0 2623 aa11.99□□□□□ -0.49
CPSF7-202ENST00000394888 CTSGP08311 255 aa11.99□□□□□ -0.49
CPSF7-202ENST00000394888 GOLT1AQ6ZVE7 132 aa11.99□□□□□ -0.49
CPSF7-202ENST00000394888 ZNF253O75346 499 aa11.99□□□□□ -0.49
CPSF7-202ENST00000394888 CHRDL1Q9BU40 450 aa11.99□□□□□ -0.49
CPSF7-202ENST00000394888 CUBNO60494 3623 aa11.99□□□□□ -0.49
CPSF7-202ENST00000394888 LINC01548A6NM66 108 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 UBE2G1P62253 170 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 COX8CQ7Z4L0 72 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 DIRC3C9JPN6 131 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 M0R3E3 92 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 RPL19P84098 196 aaKnown RBP11.98□□□□□ -0.49
CPSF7-202ENST00000394888 TOMM20LQ6UXN7 152 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 ARPC1AQ92747 370 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 NBPF19A0A087WUL8 3843 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 IL4P05112 153 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
CPSF7-202ENST00000394888 M0QZ24 198 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 HLA-DRB1P01911 266 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 C19orf54Q5BKX5 351 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 C22orf15Q8WYQ4 148 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 C8orf49Q96NF6 230 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 IGHV2-70DA0A0C4DH43 119 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 CNIH1O95406 144 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 MAP1AP78559 2803 aaPredicted RBP11.97□□□□□ -0.49
CPSF7-202ENST00000394888 SH2D7A6NKC9 451 aaPredicted RBP11.97□□□□□ -0.49
CPSF7-202ENST00000394888 TOX4O94842 621 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 IGHV3-23P01764 117 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 PLGLAQ15195 96 aa11.97□□□□□ -0.49
CPSF7-202ENST00000394888 CLPSL1A2RUU4 121 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms