RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 FAM78BQ5VT40 261 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 ZNF600Q6ZNG1 722 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 SLC7A5P1Q8MH63 180 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 OR1B1Q8NGR6 318 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 CCDC140Q96MF4 163 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 MRPL32Q9BYC8 188 aaKnown RBP8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 GNB4Q9HAV0 340 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 DOK5Q9P104 306 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 FUT9Q9Y231 359 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 SORL1Q92673 2214 aa8.42□□□□□ -1.06
VTI1BP2-201ENST00000394154 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 A0A1B0GV50 99 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 IGHV3-11P01762 117 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 INSL3P51460 131 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 RELQ04864 619 aaPredicted RBP8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 ZNF343Q6P1L6 599 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 LCNL1Q6ZST4 164 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 ZNF491Q8N8L2 437 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 RNF152Q8N8N0 203 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 TMEM37Q8WXS4 190 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 CHRDL1Q9BU40 450 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 PBDC1Q9BVG4 233 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 TECRQ9NZ01 308 aaKnown RBP8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 HIGD1AQ9Y241 93 aa8.41□□□□□ -1.06
VTI1BP2-201ENST00000394154 OR2C1O95371 312 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 LY6G6CO95867 125 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 CXorf1O96002 111 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 IL4P05112 153 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 C8orf88P0DMB2 117 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 ADMP35318 185 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 ARL3P36405 182 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 PPT1P50897 306 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 FGF8P55075 233 aaPredicted RBP8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 LCE2AQ5TA79 106 aaPredicted RBP8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 SPATA31B1PQ5VZV4 182 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 SSX7Q7RTT5 188 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 RNF125Q96EQ8 232 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 SEPSECSQ9HD40 501 aaKnown RBP8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 RNF24Q9Y225 148 aa8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 PUS1Q9Y606 427 aaKnown RBP eCLIP8.4□□□□□ -1.06
VTI1BP2-201ENST00000394154 ANKRD34BA5PLL1 514 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 BMPR1BO00238 502 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 HMGB3O15347 200 aaKnown RBP8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 GGCTO75223 188 aaKnown RBP8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 IFNA1P01562 189 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 RPLP1P05386 114 aaKnown RBP8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 STAG3L2P0CL84 134 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 STAG3L3P0CL85 134 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 PSMB3P49720 205 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 CCL20P78556 96 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 PMS2P11Q13670 270 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 KIAA0141Q14154 515 aaPredicted RBP8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 KHDC3LQ587J8 217 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 PQLC2Q6ZP29 291 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 LINC00305Q7Z4B0 112 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 IQCF2Q8IXL9 164 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 EIF4E3Q8N5X7 224 aaKnown RBP8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 MYOZ3Q8TDC0 251 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 UBE2E2Q96LR5 201 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 MRPL27Q9P0M9 148 aaKnown RBP8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 PEF1Q9UBV8 284 aaKnown RBP8.39□□□□□ -1.07
VTI1BP2-201ENST00000394154 PPP5D1E7EU14 171 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 J3QL48 77 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 EIF3GO75821 320 aaKnown RBP eCLIP8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 ARL14EPLP0DKL9 152 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 PEA15Q15121 130 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 GUK1Q16774 197 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 DEFB136Q30KP8 78 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 UQCC3Q6UW78 93 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 TOMM20LQ6UXN7 152 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 STXBP6Q8NFX7 210 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 FAM210AQ96ND0 272 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 EIF5A2Q9GZV4 153 aaKnown RBP8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 TMEM167BQ9NRX6 74 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 GNG13Q9P2W3 67 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 RABAC1Q9UI14 185 aa8.38□□□□□ -1.07
VTI1BP2-201ENST00000394154 IGHV3-35A0A0C4DH35 117 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 RBFOX3A6NFN3 312 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 NDUFA4O00483 81 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 OR7C2O60412 319 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 LGALS1P09382 135 aaKnown RBP8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 GCHFRP30047 84 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 CDX1P47902 265 aaPredicted RBP8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 FAM106AQ4KMX7 169 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 UHRF2Q96PU4 802 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 OR5B12Q96R08 314 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 SLC25A39Q9BZJ4 359 aaPredicted RBP8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 TMPRSS5Q9H3S3 457 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 SMDT1Q9H4I9 107 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 TREM1Q9NP99 234 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 MANBALQ9NQG1 85 aa8.37□□□□□ -1.07
VTI1BP2-201ENST00000394154 TRAV5A0A0B4J249 113 aa8.36□□□□□ -1.07
VTI1BP2-201ENST00000394154 ATP6V1G1O75348 118 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms