RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SMAD7O15105 426 aaKnown RBP10.72□□□□□ -0.69
LCA5-202ENST00000392959 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
LCA5-202ENST00000392959 WNT2P09544 360 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 ARTNQ5T4W7 220 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 SELENOKQ9Y6D0 94 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 FNDC10F2Z333 226 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 ZNF138P52744 262 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 MLANAQ16655 118 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 Q5PR19 223 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 TPTE2P1Q5T6R2 138 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 ERG28Q9UKR5 140 aa10.72□□□□□ -0.69
LCA5-202ENST00000392959 PTPRDP23468 1912 aa10.71□□□□□ -0.69
LCA5-202ENST00000392959 C1orf147Q96MC9 270 aaPredicted RBP10.71□□□□□ -0.69
LCA5-202ENST00000392959 HS3ST6Q96QI5 342 aa10.71□□□□□ -0.69
LCA5-202ENST00000392959 OOSP1A8MZH6 123 aa10.71□□□□□ -0.69
LCA5-202ENST00000392959 FXYD7P58549 80 aa10.71□□□□□ -0.69
LCA5-202ENST00000392959 LYPD1Q8N2G4 141 aa10.71□□□□□ -0.69
LCA5-202ENST00000392959 MDS2Q8NDY4 140 aa10.71□□□□□ -0.69
LCA5-202ENST00000392959 Q8TAT8 98 aa10.71□□□□□ -0.69
LCA5-202ENST00000392959 RSPO3Q9BXY4 272 aaPredicted RBP10.71□□□□□ -0.69
LCA5-202ENST00000392959 SIGLEC9Q9Y336 463 aa10.71□□□□□ -0.69
LCA5-202ENST00000392959 A0A0U1RRA0 63 aa10.71□□□□□ -0.7
LCA5-202ENST00000392959 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.7
LCA5-202ENST00000392959 SRD5A1P18405 259 aa10.71□□□□□ -0.7
LCA5-202ENST00000392959 C5orf64Q2M2E5 130 aa10.71□□□□□ -0.7
LCA5-202ENST00000392959 STHQ8IWL8 128 aa10.71□□□□□ -0.7
LCA5-202ENST00000392959 SBF1O95248 1867 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 TRAV40A0A0B4J280 105 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 MRPL52Q86TS9 123 aaKnown RBP10.7□□□□□ -0.7
LCA5-202ENST00000392959 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 GAFA1Q96PS6 74 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 E9PQ18 207 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 WFDC12Q8WWY7 111 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 TCF20Q9UGU0 1960 aaKnown RBP10.7□□□□□ -0.7
LCA5-202ENST00000392959 UBE2V1Q13404 147 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 PSG3Q16557 428 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 DPH3Q96FX2 82 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 IGHV3-64A0A075B6Q5 118 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 SH2D1AO60880 128 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 TOMM40O96008 361 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 IGKV1-16P04430 117 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 ZC2HC1BQ5TFG8 222 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 VMO1Q7Z5L0 202 aa10.7□□□□□ -0.7
LCA5-202ENST00000392959 A0A1W2PRX2 142 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 C9orf139Q6ZV77 190 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 Q0VG73 95 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 ANAPC13Q9BS18 74 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 XIRP1Q702N8 1843 aaKnown RBP10.69□□□□□ -0.7
LCA5-202ENST00000392959 A8MWP6 167 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 TMEM238C9JI98 176 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 MINOS1Q5TGZ0 78 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 ANAPC10Q9UM13 185 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 MINOS1-NBL1R4GNA1 71 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 PLCE1Q9P212 2302 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 KLRD1Q13241 179 aa10.69□□□□□ -0.7
LCA5-202ENST00000392959 SRRM4A7MD48 611 aaKnown RBP10.68□□□□□ -0.7
LCA5-202ENST00000392959 HTN3P15516 51 aa10.68□□□□□ -0.7
LCA5-202ENST00000392959 EREGO14944 169 aa10.68□□□□□ -0.7
LCA5-202ENST00000392959 VDAC2P45880 294 aaPredicted RBP10.68□□□□□ -0.7
LCA5-202ENST00000392959 ZNF876PQ49A33 203 aa10.68□□□□□ -0.7
LCA5-202ENST00000392959 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
LCA5-202ENST00000392959 GHRHP01286 108 aa10.68□□□□□ -0.7
LCA5-202ENST00000392959 TDGF1P3P51864 188 aa10.68□□□□□ -0.7
LCA5-202ENST00000392959 SRSF6Q13247 344 aaKnown RBP10.68□□□□□ -0.7
LCA5-202ENST00000392959 DPH3P1Q9H4G8 78 aa10.68□□□□□ -0.7
LCA5-202ENST00000392959 MORN3Q6PF18 240 aaPredicted RBP10.67□□□□□ -0.7
LCA5-202ENST00000392959 ZNF329Q86UD4 541 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 C20orf144Q9BQM9 153 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 MBD3L4A6NDZ8 208 aaPredicted RBP10.67□□□□□ -0.7
LCA5-202ENST00000392959 MBD3L3A6NE82 208 aaPredicted RBP10.67□□□□□ -0.7
LCA5-202ENST00000392959 MBD3L5A6NJ08 208 aaPredicted RBP10.67□□□□□ -0.7
LCA5-202ENST00000392959 BUB1B-PAK6H3BSN5 160 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 M0R2P5 195 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 ETV2O00321 342 aaPredicted RBP10.67□□□□□ -0.7
LCA5-202ENST00000392959 ITGB1BP1O14713 200 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 PAX9P55771 341 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 TMEM219Q86XT9 240 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 MBD3L2Q8NHZ7 208 aaPredicted RBP10.67□□□□□ -0.7
LCA5-202ENST00000392959 TMEM158Q8WZ71 300 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 MCRIP2Q9BUT9 160 aaKnown RBP10.67□□□□□ -0.7
LCA5-202ENST00000392959 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.67□□□□□ -0.7
LCA5-202ENST00000392959 TRGV4A0A0C4DH28 118 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 Q86TA4 180 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 PGPEP1Q9NXJ5 209 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 TRAV8-4A0A0B4J246 113 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
LCA5-202ENST00000392959 VWA8A3KMH1 1905 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 CD5LO43866 347 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 CKS1BP61024 79 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 SPACA3Q8IXA5 215 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 POLR3KQ9Y2Y1 108 aaPredicted RBP10.66□□□□□ -0.7
LCA5-202ENST00000392959 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
LCA5-202ENST00000392959 A0A1B0GUS0 222 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 VCYO14598 125 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 SLC25A20O43772 301 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 IGHG3P01860 377 aa10.66□□□□□ -0.7
LCA5-202ENST00000392959 ZNF688P0C7X2 276 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms