RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 NEGR1Q7Z3B1 354 aa12.02□□□□□ -0.48
SHTN1-204ENST00000392903 CACNG8Q8WXS5 425 aa12.02□□□□□ -0.48
SHTN1-204ENST00000392903 FXYD5Q96DB9 178 aa12.02□□□□□ -0.48
SHTN1-204ENST00000392903 GPR82Q96P67 336 aa12.02□□□□□ -0.48
SHTN1-204ENST00000392903 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.48
SHTN1-204ENST00000392903 GFRA4Q9GZZ7 299 aa12.02□□□□□ -0.48
SHTN1-204ENST00000392903 TEX50A0A1B0GTY4 177 aa12.02□□□□□ -0.49
SHTN1-204ENST00000392903 LYNX1G3V0Z9 82 aa12.02□□□□□ -0.49
SHTN1-204ENST00000392903 K7EP34 96 aa12.02□□□□□ -0.49
SHTN1-204ENST00000392903 UPK2O00526 184 aa12.02□□□□□ -0.49
SHTN1-204ENST00000392903 LYNX1P0DP58 116 aa12.02□□□□□ -0.49
SHTN1-204ENST00000392903 APOBEC3AP31941 199 aaPredicted RBP12.02□□□□□ -0.49
SHTN1-204ENST00000392903 FOXE3Q13461 319 aa12.02□□□□□ -0.49
SHTN1-204ENST00000392903 RBPMS2Q6ZRY4 209 aaKnown RBP12.02□□□□□ -0.49
SHTN1-204ENST00000392903 COL25A1Q9BXS0 654 aaPredicted RBP12.02□□□□□ -0.49
SHTN1-204ENST00000392903 NGBQ9NPG2 151 aa12.02□□□□□ -0.49
SHTN1-204ENST00000392903 EPDR1Q9UM22 224 aa12.02□□□□□ -0.49
SHTN1-204ENST00000392903 MALRD1Q5VYJ5 2156 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 COX7A2P2O60397 106 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 GRNP28799 593 aaKnown RBP12.01□□□□□ -0.49
SHTN1-204ENST00000392903 PRB3Q04118 309 aaPredicted RBP12.01□□□□□ -0.49
SHTN1-204ENST00000392903 C10orf113Q5VZT2 155 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 ZNF833PQ6ZTB9 187 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 C5orf17Q8NAS9 161 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 OR1L4Q8NGR5 311 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 DPF1Q92782 380 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 AP1S3Q96PC3 154 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.01□□□□□ -0.49
SHTN1-204ENST00000392903 C19orf71A6NCJ1 209 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 A6NDN8 102 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 FSTL3O95633 263 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 APOA2P02652 100 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 DLX1P56177 255 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 GNG5P63218 68 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 HARBI1Q96MB7 349 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 JMJD8Q96S16 334 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 ZNF492Q9P255 531 aa12.01□□□□□ -0.49
SHTN1-204ENST00000392903 FAM90A27PA6NNH2 459 aa12□□□□□ -0.49
SHTN1-204ENST00000392903 P01737 135 aa12□□□□□ -0.49
SHTN1-204ENST00000392903 FGF6P10767 208 aa12□□□□□ -0.49
SHTN1-204ENST00000392903 LINC00322Q6ZN03 302 aaPredicted RBP12□□□□□ -0.49
SHTN1-204ENST00000392903 VKORC1Q9BQB6 163 aa12□□□□□ -0.49
SHTN1-204ENST00000392903 SPTBN1Q01082 2364 aaKnown RBP12□□□□□ -0.49
SHTN1-204ENST00000392903 H0Y8G0 127 aa12□□□□□ -0.49
SHTN1-204ENST00000392903 ZNF138P52744 262 aa12□□□□□ -0.49
SHTN1-204ENST00000392903 PATE2Q6UY27 113 aa12□□□□□ -0.49
SHTN1-204ENST00000392903 NEU4Q8WWR8 484 aaPredicted RBP12□□□□□ -0.49
SHTN1-204ENST00000392903 E7EUB6 86 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 CHEK1O14757 476 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 TNFRSF13BO14836 293 aaPredicted RBP11.99□□□□□ -0.49
SHTN1-204ENST00000392903 LOXP28300 417 aaPredicted RBP11.99□□□□□ -0.49
SHTN1-204ENST00000392903 CEACAM3P40198 252 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 TMEM30BQ3MIR4 351 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 TMUB1Q9BVT8 246 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 RAXQ9Y2V3 346 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 MOSP00540 346 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 SLC25A5P05141 298 aaKnown RBP11.99□□□□□ -0.49
SHTN1-204ENST00000392903 PDPNQ86YL7 162 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 FLYWCH2Q96CP2 140 aaKnown RBP11.99□□□□□ -0.49
SHTN1-204ENST00000392903 ZNF747Q9BV97 191 aa11.99□□□□□ -0.49
SHTN1-204ENST00000392903 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.98□□□□□ -0.49
SHTN1-204ENST00000392903 DLL1O00548 723 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 CD3EP07766 207 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 ZNF137PP52743 207 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 TMEM177Q53S58 311 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 ASH1LQ9NR48 2969 aaKnown RBP11.98□□□□□ -0.49
SHTN1-204ENST00000392903 HAX1O00165 279 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 SNAI2O43623 268 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 LTAP01374 205 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 UQCRFS1P47985 274 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 TEX45Q8NA69 505 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 OR5AN1Q8NGI8 311 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 OR2K2Q8NGT1 345 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 OSR1Q8TAX0 266 aaPredicted RBP11.98□□□□□ -0.49
SHTN1-204ENST00000392903 FMC1Q96HJ9 113 aa11.98□□□□□ -0.49
SHTN1-204ENST00000392903 HRNRQ86YZ3 2850 aaPredicted RBP11.98□□□□□ -0.49
SHTN1-204ENST00000392903 IGHV3-72A0A0B4J1Y9 119 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 H3BUT2 72 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 SMIM17P0DL12 118 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 C10orf55Q5SWW7 151 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 OR5A1Q8NGJ0 315 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 SVIPQ8NHG7 77 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 RITA1Q96K30 269 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 SGK494Q96LW2 274 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 RABAC1Q9UI14 185 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 MSRB2Q9Y3D2 182 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 A0A0G2JLM5 398 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 NPIPB6E9PJ23 425 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 APOHP02749 345 aaPredicted RBP11.97□□□□□ -0.49
SHTN1-204ENST00000392903 LGALS7P47929 136 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 SSBP2P81877 361 aaPredicted RBP11.97□□□□□ -0.49
SHTN1-204ENST00000392903 STXBP6Q8NFX7 210 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 OR1N2Q8NGR9 330 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 TMEM186Q96B77 213 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 AP5S1Q9NUS5 200 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 ABCA1O95477 2261 aa11.97□□□□□ -0.49
SHTN1-204ENST00000392903 TCRBV4S1A1TA0A5B7 111 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms