RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 PRTN3P24158 256 aa13.15□□□□□ -0.31
TRA2A-202ENST00000392502 LINC01559Q495D7 138 aa13.15□□□□□ -0.31
TRA2A-202ENST00000392502 TMEM78Q5T7P6 136 aa13.15□□□□□ -0.31
TRA2A-202ENST00000392502 PRSS3P2Q8NHM4 247 aa13.15□□□□□ -0.31
TRA2A-202ENST00000392502 SSMEM1Q8WWF3 244 aa13.15□□□□□ -0.31
TRA2A-202ENST00000392502 DNAJC30Q96LL9 226 aa13.15□□□□□ -0.31
TRA2A-202ENST00000392502 C7orf69Q9H7B7 122 aa13.15□□□□□ -0.31
TRA2A-202ENST00000392502 RAB9BQ9NP90 201 aa13.15□□□□□ -0.31
TRA2A-202ENST00000392502 K7ERJ3 54 aa13.14□□□□□ -0.31
TRA2A-202ENST00000392502 EIF4EBP1Q13541 118 aaPredicted RBP13.14□□□□□ -0.31
TRA2A-202ENST00000392502 TMEM116Q8NCL8 245 aa13.14□□□□□ -0.31
TRA2A-202ENST00000392502 PRSS22Q9GZN4 317 aa13.14□□□□□ -0.31
TRA2A-202ENST00000392502 AMMECR1Q9Y4X0 333 aaPredicted RBP13.14□□□□□ -0.31
TRA2A-202ENST00000392502 DMXL1Q9Y485 3027 aa13.14□□□□□ -0.31
TRA2A-202ENST00000392502 NBL1P41271 181 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 FHL3Q13643 280 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 MDP1Q86V88 176 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 GLMPQ8WWB7 406 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 RND1Q92730 232 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 LINC01619G3V211 115 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 SNCGO76070 127 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 ZNF816Q0VGE8 651 aaPredicted RBP13.13□□□□□ -0.31
TRA2A-202ENST00000392502 NFE4Q86UQ8 179 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 TCF19Q9Y242 345 aa13.13□□□□□ -0.31
TRA2A-202ENST00000392502 F11RQ9Y624 299 aaKnown RBP13.13□□□□□ -0.31
TRA2A-202ENST00000392502 NDUFS7O75251 213 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 C8orf88P0DMB2 117 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 DIAPH2-AS1Q14236 149 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 ZNF766Q5HY98 468 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 ABHD12Q8N2K0 398 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 EP300Q09472 2414 aaPredicted RBP13.12□□□□□ -0.31
TRA2A-202ENST00000392502 TRGV5A0A0B4J1U4 118 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 TRGV8A0A0C4DH27 118 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 CA6P23280 308 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 CACNG7P62955 275 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 NABP2Q9BQ15 211 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 PPDPFQ9H3Y8 114 aa13.12□□□□□ -0.31
TRA2A-202ENST00000392502 PEX7O00628 323 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 TM4SF20Q53R12 229 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 ZNF503Q96F45 646 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 RITA1Q96K30 269 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 LINC00479Q96M42 142 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 TPPP3Q9BW30 176 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 SLC25A2Q9BXI2 301 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 AMTNQ6UX39 209 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 C1orf159Q96HA4 380 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 FAM234AQ9H0X4 552 aa13.11□□□□□ -0.31
TRA2A-202ENST00000392502 TRBV25-1A0A075B6N4 114 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 TRAV24A0A0B4J272 114 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 IGHV3-64DA0A0J9YX35 117 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 GFRA3O60609 400 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 IGHG3P01860 377 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 RBP4P02753 201 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 SPANXDQ9BXN6 97 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 LAMA5O15230 3695 aa13.1□□□□□ -0.31
TRA2A-202ENST00000392502 HBDP02042 147 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 ZNF138P52744 262 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 OR10J6PQ8NGY7 276 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 TMEM158Q8WZ71 300 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 HSD17B10Q99714 261 aaKnown RBP13.09□□□□□ -0.31
TRA2A-202ENST00000392502 MDFICQ9P1T7 246 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 BOD1L1Q8NFC6 3051 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 PRR14LQ5THK1 2151 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 A4D1N5 150 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 P01737 135 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 MEIG1Q5JSS6 88 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 WDR86Q86TI4 376 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
TRA2A-202ENST00000392502 SRRM4A7MD48 611 aaKnown RBP13.08□□□□□ -0.32
TRA2A-202ENST00000392502 MOSP00540 346 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 SMCPP49901 116 aaPredicted RBP13.08□□□□□ -0.32
TRA2A-202ENST00000392502 ALKBH6Q3KRA9 238 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 ZNF497Q6ZNH5 498 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 SBSPONQ8IVN8 264 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 IFI27L1Q96BM0 104 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 DUTP33316 252 aaKnown RBP13.08□□□□□ -0.32
TRA2A-202ENST00000392502 KLF17Q5JT82 389 aaPredicted RBP13.08□□□□□ -0.32
TRA2A-202ENST00000392502 SLC25A48Q6ZT89 311 aaKnown RBP13.08□□□□□ -0.32
TRA2A-202ENST00000392502 MOB3BQ86TA1 216 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 ZMAT4Q9H898 229 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 SIGLEC9Q9Y336 463 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.32
TRA2A-202ENST00000392502 TIMM8BQ9Y5J9 83 aaPredicted RBP13.08□□□□□ -0.32
TRA2A-202ENST00000392502 A0A1W2PPI3 338 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 SMIM9A6NGZ8 99 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 C17orf98A8MV24 154 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 SCGB2A1O75556 95 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 WT1P19544 449 aaPredicted RBP13.07□□□□□ -0.32
TRA2A-202ENST00000392502 KIR2DS2P43631 304 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 RIGQ13278 110 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 PPP1R27Q86WC6 154 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 DAZAP1Q96EP5 407 aaKnown RBP13.07□□□□□ -0.32
TRA2A-202ENST00000392502 FBXL15Q9H469 300 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 RIF1Q5UIP0 2472 aaKnown RBP13.07□□□□□ -0.32
TRA2A-202ENST00000392502 LYZL6O75951 148 aa13.07□□□□□ -0.32
TRA2A-202ENST00000392502 ACTL6BO94805 426 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms