RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ACOT13Q9NPJ3 140 aa-0.9□□□□□ -2.55
TRAJ28-201ENST00000390509 OSTCQ9NRP0 149 aa-0.9□□□□□ -2.55
TRAJ28-201ENST00000390509 KIF3AQ9Y496 699 aa-0.9□□□□□ -2.55
TRAJ28-201ENST00000390509 ARL5AQ9Y689 179 aa-0.9□□□□□ -2.55
TRAJ28-201ENST00000390509 COL24A1Q17RW2 1714 aa-0.9□□□□□ -2.55
TRAJ28-201ENST00000390509 MYO15BQ96JP2 1530 aa-0.9□□□□□ -2.55
TRAJ28-201ENST00000390509 DMDP11532 3685 aa-0.91□□□□□ -2.55
TRAJ28-201ENST00000390509 ATG2AQ2TAZ0 1938 aa-0.91□□□□□ -2.55
TRAJ28-201ENST00000390509 KNDC1Q76NI1 1749 aa-0.91□□□□□ -2.55
TRAJ28-201ENST00000390509 IGHV1-69-2A0A0G2JMI3 117 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 C9orf170A2RU37 121 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 SMCO3A2RU48 225 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 LST1O00453 97 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 TPST1O60507 370 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 NOL3O60936 208 aaKnown RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HSBP1O75506 76 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 TRAPPC6AO75865 159 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 FADS2O95864 444 aaKnown RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 AK1P00568 194 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ASS1P00966 412 aaKnown RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 APOC1P02654 83 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ATP5G1P05496 136 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 KCNE1P15382 129 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H2BOP23527 126 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ATP5DP30049 168 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HMOX2P30519 316 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 AGTR1P30556 359 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H2BBP33778 126 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 RPA3P35244 121 aaPredicted RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 DEKP35659 375 aaKnown RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ASIPP42127 132 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 RAB5CP51148 216 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H2BDP58876 126 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 DSTNP60981 165 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 UBE2D3P61077 147 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 YPEL3P61236 119 aaPredicted RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ATP6V0D1P61421 351 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H2BCP62807 126 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 UBE2D2P62837 147 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 DYNLL1P63167 89 aaKnown RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 DYNLT1P63172 113 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 FABP5Q01469 135 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 NEDD8Q15843 81 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST2H2BEQ16778 126 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 SAPCD1Q5SSQ6 148 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 Q5VV11 94 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 SPOPLQ6IQ16 392 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 SLC48A1Q6P1K1 146 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 LYPD5Q6UWN5 251 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ASCL4Q6XD76 172 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 RUFY3Q7L099 469 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 COMMD7Q86VX2 200 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 CCDC170Q8IYT3 715 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 C4orf33Q8N1A6 199 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 LINC00269Q8N2A0 174 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 LRRC18Q8N456 261 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 LSMEM1Q8N8F7 131 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ZNF321PQ8N8H1 164 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 OR10X1Q8NGY0 326 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 OR4K15Q8NH41 348 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H2BHQ93079 126 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ZHX1-C8orf76Q96EF9 292 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 C19orf60Q96EN9 201 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 USMG5Q96IX5 58 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 C9orf72Q96LT7 481 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HYLS1Q96M11 299 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 FAM210AQ96ND0 272 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 OR4C12Q96R67 309 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 MYCBPQ99417 103 aaPredicted RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H2BNQ99877 126 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HIST1H2BMQ99879 126 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 TMEM208Q9BTX3 173 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 IQCGQ9H095 443 aaKnown RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 HDHD2Q9H0R4 259 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 CST11Q9H112 138 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 OR51I2Q9H344 312 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ARMC7Q9H6L4 198 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 NAA60Q9H7X0 242 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 NPVFQ9HCQ7 196 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 MID1IP1Q9NPA3 183 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ZC4H2Q9NQZ6 224 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 EURLQ9NYK6 297 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 MED11Q9P086 117 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 COMMD3Q9UBI1 195 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ERGIC3Q9Y282 383 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 MRPS7Q9Y2R9 242 aaKnown RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 NUBP2Q9Y5Y2 271 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 V9GYV3 84 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 SCN10AQ9Y5Y9 1956 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 COL14A1Q05707 1796 aaKnown RBP-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 KIDINS220Q9ULH0 1771 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 ZNF609O15014 1411 aa-0.91□□□□□ -2.56
TRAJ28-201ENST00000390509 GOLGA3Q08378 1498 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 GAPVD1Q14C86 1478 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 MAGI1Q96QZ7 1491 aaPredicted RBP-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 FREM2Q5SZK8 3169 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 ARHGEF11O15085 1522 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 TOPBP1Q92547 1522 aa-0.92□□□□□ -2.56
TRAJ28-201ENST00000390509 TRAV8-7A0A075B6U6 113 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms