RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TMEM78Q5T7P6 136 aa1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 PATE2Q6UY27 113 aa1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 SMIM15Q7Z3B0 74 aa1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 ANGPTL5Q86XS5 388 aa1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 ISOC1Q96CN7 298 aa1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 MCEEQ96PE7 176 aa1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 OR52A1Q9UKL2 312 aa1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 ZNF106Q9H2Y7 1883 aaKnown RBP1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 UBR2Q8IWV8 1755 aa1.01□□□□□ -2.25
TRAJ40-201ENST00000390497 FN1P02751 2386 aaKnown RBP1□□□□□ -2.25
TRAJ40-201ENST00000390497 TRAPPC8Q9Y2L5 1435 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 MAP1LC3B2A6NCE7 125 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 CCDC160A6NGH7 325 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 E7EUB6 86 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 H3BQV1 296 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 ERC2-IT1O76042 136 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 CST7O76096 145 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 LYNX1P0DP58 116 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 GLRXP35754 106 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 MPV17LQ2QL34 196 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 DEFB115Q30KQ5 88 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 FKBP1CQ5VVH2 108 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 DCUN1D2Q6PH85 259 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 ZNF833PQ6ZTB9 187 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 PRR15Q8IV56 129 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 CLECL1Q8IZS7 167 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 Q8N814 137 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 C15orf53Q8NAA6 179 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 DYDC1Q8WWB3 177 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 PATE1Q8WXA2 126 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 CACYBPQ9HB71 228 aaKnown RBP1□□□□□ -2.25
TRAJ40-201ENST00000390497 PBRM1Q86U86 1689 aa1□□□□□ -2.25
TRAJ40-201ENST00000390497 DENND4CQ5VZ89 1909 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 PLXND1Q9Y4D7 1925 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 TECPR2O15040 1411 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 KIAA1107Q9UPP5 1409 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 A0A087WSZ3 146 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 TRBV6-7A0A0A0MS04 114 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 TRAV10A0A0B4J240 114 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 M0R233 179 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 PGRMC1O00264 195 aaKnown RBP0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 INE1O15225 51 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 LYRM1O43325 122 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 CXCL1P09341 107 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 ZNF93P35789 620 aaPredicted RBP0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 TMBIM6P55061 237 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 ARPP19P56211 112 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 HBBP68871 147 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 CDK6Q00534 326 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 NUMA1Q14980 2115 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 LTC4SQ16873 150 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 TEX261Q6UWH6 196 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 TOMM20LQ6UXN7 152 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 PHF5AQ7RTV0 110 aaKnown RBP0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 OR5AS1Q8N127 324 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 OR4K15Q8NH41 348 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 POP5Q969H6 163 aaKnown RBP0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 CCDC32Q9BV29 185 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 DDA1Q9BW61 102 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 ORMDL1Q9P0S3 153 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 LAMTOR2Q9Y2Q5 125 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 NUBP2Q9Y5Y2 271 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 CHCHD2Q9Y6H1 151 aaPredicted RBP0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 U3KQ87 197 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 SCN10AQ9Y5Y9 1956 aa0.99□□□□□ -2.25
TRAJ40-201ENST00000390497 RTL9Q8NET4 1388 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 TRAV27A0A087WT01 109 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 TRBV6-4A0A1B0GX49 114 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 TRDV1A0A1B0GX56 115 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 OR2T8A6NH00 312 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 RER1O15258 196 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 IFNA21P01568 189 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 CXCL8P10145 99 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 CNBPP62633 177 aaKnown RBP0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 GDF5OSQ5U4N7 250 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 KRTAP5-2Q701N4 177 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 ARPINQ7Z6K5 226 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 LRRC18Q8N456 261 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 CHCHD1Q96BP2 118 aaKnown RBP0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 BORCS8Q96FH0 119 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 HYLS1Q96M11 299 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 TCEAL2Q9H3H9 227 aaPredicted RBP0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 CDC42SE1Q9NRR8 79 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 MED11Q9P086 117 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 FRMPD1Q5SYB0 1578 aa0.98□□□□□ -2.25
TRAJ40-201ENST00000390497 ANAPC1Q9H1A4 1944 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 OBSL1O75147 1896 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 hDV103S1A0JD37 113 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 ODAMA1E959 279 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 CCL16O15467 120 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 BCL2P10415 239 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 B2MP61769 119 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 TEN1Q86WV5 123 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 BORCS5Q969J3 196 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 ODF3Q96PU9 254 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 MYH11P35749 1972 aa0.97□□□□□ -2.25
TRAJ40-201ENST00000390497 RTTNQ86VV8 2226 aa0.96□□□□□ -2.26
TRAJ40-201ENST00000390497 SORL1Q92673 2214 aa0.96□□□□□ -2.26
TRAJ40-201ENST00000390497 IGLV3-32A0A0A0MS00 114 aa0.96□□□□□ -2.26
TRAJ40-201ENST00000390497 A0A1W2PRE2 83 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms