RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 GNLYP22749 145 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 Q71RC1 249 aaPredicted RBP12.67□□□□□ -0.38
ALK-201ENST00000389048 STRCP1A6NGW2 1772 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 GAGE12JA6NER3 117 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 IGKV1-5P01602 117 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 GAGE1Q13065 139 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 GAGE4Q13068 117 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 GAGE5Q13069 117 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 MRPL14Q6P1L8 145 aaKnown RBP12.67□□□□□ -0.38
ALK-201ENST00000389048 RPP25LQ8N5L8 163 aaKnown RBP12.67□□□□□ -0.38
ALK-201ENST00000389048 SUPT4H1P63272 117 aaKnown RBP12.67□□□□□ -0.38
ALK-201ENST00000389048 ZNF318Q5VUA4 2279 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 LYPD3O95274 346 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 CFHR2P36980 270 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 NABP1Q96AH0 204 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 TSSC4Q9Y5U2 329 aaPredicted RBP12.66□□□□□ -0.38
ALK-201ENST00000389048 FAM231BA6NCW3 169 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 VCYO14598 125 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 IFI6P09912 130 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 SYNJ2BPP57105 145 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 SLC25A48Q6ZT89 311 aaKnown RBP12.66□□□□□ -0.38
ALK-201ENST00000389048 CSRP3P50461 194 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 NPSP0C0P6 89 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 PMVKQ15126 192 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 RPRMLQ8N4K4 120 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 SNHG12Q9BXW3 62 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 EFNA2O43921 213 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 MPZP25189 248 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 RNASE13Q5GAN3 156 aaKnown RBP12.66□□□□□ -0.38
ALK-201ENST00000389048 SPSB3Q6PJ21 355 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 REG4Q9BYZ8 158 aa12.66□□□□□ -0.38
ALK-201ENST00000389048 ANXA2RQ3ZCQ2 193 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 XCL2Q9UBD3 114 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 H0YJW9 148 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 COL4A5P29400 1685 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 SPACA3Q8IXA5 215 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 SS18Q15532 418 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 VWCEQ96DN2 955 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 MPDZO75970 2070 aa12.65□□□□□ -0.38
ALK-201ENST00000389048 A0A1B0GWJ7 208 aa12.65□□□□□ -0.39
ALK-201ENST00000389048 RASL11AQ6T310 242 aa12.65□□□□□ -0.39
ALK-201ENST00000389048 COL8A2P25067 703 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 IL17RELQ6ZVW7 336 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 NEUROG3Q9Y4Z2 214 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 LTBP4Q8N2S1 1624 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 CASP8AP2Q9UKL3 1982 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 J3QRE1 110 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 MYMXA0A1B0GTQ4 84 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
ALK-201ENST00000389048 TRAV12-2A0A075B6T6 113 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 ARMS2P0C7Q2 107 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 TP53TG1Q9Y2A0 90 aa12.64□□□□□ -0.39
ALK-201ENST00000389048 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
ALK-201ENST00000389048 TMEM178BH3BS89 294 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 A0A0G2JRQ6 117 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 CGB3P0DN86 165 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 RHPN1-AS1Q9BWJ2 59 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 DEFB131AP59861 70 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 SPINK13Q1W4C9 94 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 TMEM126AQ9H061 195 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 COL18A1P39060 1754 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 HOXD3P31249 432 aaPredicted RBP12.63□□□□□ -0.39
ALK-201ENST00000389048 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
ALK-201ENST00000389048 BUB1B-PAK6H3BSN5 160 aa12.63□□□□□ -0.39
ALK-201ENST00000389048 HAMPP81172 84 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 GAFA1Q96PS6 74 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 F5H768 121 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 H3BMM0 161 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 OVOL3O00110 214 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 UBE2WQ96B02 151 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 TMEM242Q9NWH2 141 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 TRBV24-1A0A075B6N3 115 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 GGNQ86UU5 652 aa12.62□□□□□ -0.39
ALK-201ENST00000389048 TINCRA0A1B0GVN0 87 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 CRYGSP22914 178 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 PATJQ8NI35 1801 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 NDUFS5O43920 106 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 ATP6V0BQ99437 205 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 TRBV7-1A0A0A6YYK4 115 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 IGKV1-16P04430 117 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 SLC25A16P16260 332 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 TRGV9Q99603 122 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 LIME1Q9H400 295 aa12.61□□□□□ -0.39
ALK-201ENST00000389048 A0A0G2JNJ9 132 aa12.6□□□□□ -0.39
ALK-201ENST00000389048 Q9UFV3 132 aa12.6□□□□□ -0.39
ALK-201ENST00000389048 ESPL1Q14674 2120 aa12.6□□□□□ -0.39
ALK-201ENST00000389048 GAGE6Q13070 117 aa12.6□□□□□ -0.39
ALK-201ENST00000389048 K7ERJ3 54 aa12.6□□□□□ -0.39
ALK-201ENST00000389048 DEFB105AQ8NG35 78 aa12.6□□□□□ -0.39
ALK-201ENST00000389048 SIPA1L3O60292 1781 aaPredicted RBP12.6□□□□□ -0.39
ALK-201ENST00000389048 WIPF3A6NGB9 483 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 MST1P26927 711 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 FLVCR1-AS1Q8TAF5 88 aa12.59□□□□□ -0.39
ALK-201ENST00000389048 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
ALK-201ENST00000389048 DOCK4Q8N1I0 1966 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms