RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 CEP290O15078 2479 aa16.81■□□□□ 0.28
NKX3-2-201ENST00000382438 IGHV1-45A0A0A0MS14 117 aa16.81■□□□□ 0.28
NKX3-2-201ENST00000382438 LAMTOR5O43504 91 aa16.81■□□□□ 0.28
NKX3-2-201ENST00000382438 PRCDQ00LT1 54 aa16.81■□□□□ 0.28
NKX3-2-201ENST00000382438 SFTA2Q6UW10 78 aa16.81■□□□□ 0.28
NKX3-2-201ENST00000382438 C11orf53Q8IXP5 236 aa16.81■□□□□ 0.28
NKX3-2-201ENST00000382438 C1QTNF4Q9BXJ3 329 aa16.81■□□□□ 0.28
NKX3-2-201ENST00000382438 HIGD1BQ9P298 99 aa16.81■□□□□ 0.28
NKX3-2-201ENST00000382438 TNFRSF13BO14836 293 aaPredicted RBP16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 FSTL3O95633 263 aa16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 RIGQ13278 110 aa16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 PCSK5Q92824 1860 aa16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 C12orf49Q9H741 205 aa16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 SMKR1H3BMG3 65 aa16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 TCRAP04437 139 aa16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 AMN1Q8IY45 258 aa16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 RBMXL3Q8N7X1 1067 aaKnown RBP16.8■□□□□ 0.28
NKX3-2-201ENST00000382438 PINLYPA6NC86 204 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 TMEM240Q5SV17 173 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 FMC1Q96HJ9 113 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 ZNF714Q96N38 554 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 WI2-2373I1.2A0A1W2PRP0 233 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 LINC01548A6NM66 108 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 SMCPP49901 116 aaPredicted RBP16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 ZNF562Q6V9R5 426 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 SLC25A45Q8N413 288 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 CD177Q8N6Q3 437 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 IMMP1LQ96LU5 166 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 HHLA3Q9XRX5 114 aa16.79■□□□□ 0.28
NKX3-2-201ENST00000382438 DLL1O00548 723 aa16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 BRI3O95415 125 aa16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 C2orf83Q53S99 150 aa16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 SLC25A48Q6ZT89 311 aaKnown RBP16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 IGKV1-16P04430 117 aa16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 SAA2P0DJI9 122 aaPredicted RBP16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 COX6A1P12074 109 aa16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 MBNL2Q5VZF2 373 aaKnown RBP16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 OR1L4Q8NGR5 311 aa16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 MRPL36Q9P0J6 103 aaKnown RBP16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 TMEM213A2RRL7 107 aa16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 ABHD17BQ5VST6 288 aa16.78■□□□□ 0.28
NKX3-2-201ENST00000382438 PRRC2CQ9Y520 2896 aaKnown RBP16.77■□□□□ 0.28
NKX3-2-201ENST00000382438 INTS1Q8N201 2190 aaKnown RBP16.77■□□□□ 0.28
NKX3-2-201ENST00000382438 CYB561P49447 251 aa16.77■□□□□ 0.28
NKX3-2-201ENST00000382438 LOXL3P58215 753 aa16.77■□□□□ 0.28
NKX3-2-201ENST00000382438 MRPL14Q6P1L8 145 aaKnown RBP16.77■□□□□ 0.28
NKX3-2-201ENST00000382438 MAPKAPK5-AS1Q8N8E1 139 aa16.77■□□□□ 0.28
NKX3-2-201ENST00000382438 Q9H3A6 140 aa16.77■□□□□ 0.28
NKX3-2-201ENST00000382438 PLXNB1O43157 2135 aa16.77■□□□□ 0.28
NKX3-2-201ENST00000382438 RRN3P1Q2M238 152 aa16.77■□□□□ 0.27
NKX3-2-201ENST00000382438 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.76■□□□□ 0.27
NKX3-2-201ENST00000382438 ZNF785A8K8V0 405 aa16.76■□□□□ 0.27
NKX3-2-201ENST00000382438 CD27P26842 260 aa16.76■□□□□ 0.27
NKX3-2-201ENST00000382438 E7EUB6 86 aa16.76■□□□□ 0.27
NKX3-2-201ENST00000382438 MPV17P39210 176 aa16.76■□□□□ 0.27
NKX3-2-201ENST00000382438 KIR2DS2P43631 304 aa16.76■□□□□ 0.27
NKX3-2-201ENST00000382438 SRSF6Q13247 344 aaKnown RBP16.76■□□□□ 0.27
NKX3-2-201ENST00000382438 TMSB15BA0A087X1C1 80 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 IGHV1OR15-9A0A0B4J2B8 117 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 Q6AWC8 147 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 GOLT1AQ6ZVE7 132 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 Q86TA4 180 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 CFAP47Q6ZTR5 3102 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 UPK2O00526 184 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 PRSS1P07477 247 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 CT45A10P0DMU9 189 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 ZC2HC1BQ5TFG8 222 aa16.75■□□□□ 0.27
NKX3-2-201ENST00000382438 CRYGCP07315 174 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 RPL32P62910 135 aaKnown RBP16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 SMRP1Q8NCR6 262 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 FAM110AQ9BQ89 295 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 IGKV1D-37A0A075B6S9 117 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 IGKV3D-15A0A087WSY6 115 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 IGLV3-19P01714 112 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 RUSC1-AS1Q66K80 236 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 HIST1H4GQ99525 98 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 EXOC3-AS1Q8N2X6 119 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 ZNRD1Q9P1U0 126 aa16.74■□□□□ 0.27
NKX3-2-201ENST00000382438 RBP4P02753 201 aa16.73■□□□□ 0.27
NKX3-2-201ENST00000382438 NHLRC4P0CG21 123 aaPredicted RBP16.73■□□□□ 0.27
NKX3-2-201ENST00000382438 PAX8Q06710 450 aa16.73■□□□□ 0.27
NKX3-2-201ENST00000382438 AHCTF1Q8WYP5 2266 aa16.73■□□□□ 0.27
NKX3-2-201ENST00000382438 ODF1Q14990 250 aa16.73■□□□□ 0.27
NKX3-2-201ENST00000382438 ZNRF1Q8ND25 227 aa16.73■□□□□ 0.27
NKX3-2-201ENST00000382438 OR1L8Q8NGR8 309 aa16.73■□□□□ 0.27
NKX3-2-201ENST00000382438 A0A1B0GW15 77 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 NPYP01303 97 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 PRDX2P32119 198 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 TBC1D28Q2M2D7 210 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 KIR2DL4Q99706 377 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 TRBV20-1A0A075B6N2 111 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 NXPH1P58417 271 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 CFAP126Q5VTH2 177 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 ZFAND6Q6FIF0 208 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 ORMDL3Q8N138 153 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 CARD19Q96LW7 228 aa16.72■□□□□ 0.27
NKX3-2-201ENST00000382438 PRR7Q8TB68 274 aa16.71■□□□□ 0.27
NKX3-2-201ENST00000382438 TMEM160Q9NX00 188 aa16.71■□□□□ 0.27
NKX3-2-201ENST00000382438 IGHV3OR15-7A0A075B7D8 119 aa16.71■□□□□ 0.27
NKX3-2-201ENST00000382438 IGKCP01834 107 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms