RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 PRDX2P32119 198 aa15.24■□□□□ 0.03
SMARCD1-201ENST00000381513 XGP55808 180 aa15.24■□□□□ 0.03
SMARCD1-201ENST00000381513 C12orf74Q32Q52 190 aa15.24■□□□□ 0.03
SMARCD1-201ENST00000381513 HIST1H4GQ99525 98 aa15.24■□□□□ 0.03
SMARCD1-201ENST00000381513 PGPEP1Q9NXJ5 209 aa15.24■□□□□ 0.03
SMARCD1-201ENST00000381513 C10orf142B7Z368 130 aa15.24■□□□□ 0.03
SMARCD1-201ENST00000381513 INTS1Q8N201 2190 aaKnown RBP15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 IGKV1-16P04430 117 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 MPV17P39210 176 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 GUSBP11Q6P575 273 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 Q6ZUT4 128 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 CD177Q8N6Q3 437 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 CDIP1Q9H305 208 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 FREM2Q5SZK8 3169 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 SMKR1H3BMG3 65 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 UPK2O00526 184 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 TMEM95Q3KNT9 176 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 RND1Q92730 232 aa15.23■□□□□ 0.03
SMARCD1-201ENST00000381513 IGKV3D-15A0A087WSY6 115 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 PRRG2O14669 202 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 ZNRF1Q8ND25 227 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 LINC00312Q9Y6C7 94 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 AGRNO00468 2067 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 C16orf97H3BN30 126 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 MYCNOSP40205 109 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 SMIM20Q8N5G0 67 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 NAV3Q8IVL0 2385 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 ORMDL3Q8N138 153 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 SSUH2Q9Y2M2 353 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 ICE1Q9Y2F5 2266 aa15.22■□□□□ 0.03
SMARCD1-201ENST00000381513 IGHV3OR15-7A0A075B7D8 119 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 NPIPB5A8MRT5 1133 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 TIMM8AO60220 97 aaPredicted RBP15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 KLRD1Q13241 179 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 ZC2HC1BQ5TFG8 222 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 C11orf53Q8IXP5 236 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 IGHV5-10-1A0A0J9YXX1 117 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 TMEM213A2RRL7 107 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 SPINK14Q6IE38 97 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 Q86TA4 180 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 CACNG8Q8WXS5 425 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 HIGD1BQ9P298 99 aa15.21■□□□□ 0.03
SMARCD1-201ENST00000381513 PRSS29PA6NIE9 313 aa15.21■□□□□ 0.02
SMARCD1-201ENST00000381513 FAM90A1Q86YD7 464 aa15.21■□□□□ 0.02
SMARCD1-201ENST00000381513 OR1L8Q8NGR8 309 aa15.21■□□□□ 0.02
SMARCD1-201ENST00000381513 IGHV3-21A0A0B4J1V1 117 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 A0A1W2PQM1 296 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 MAGEA5P43359 124 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 TMEM160Q9NX00 188 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 CALYQ9NYX4 217 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 EYSQ5T1H1 3165 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 CKS2P33552 79 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 LOXL3P58215 753 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 EXOC3-AS1Q8N2X6 119 aa15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 KLF14Q8TD94 323 aaPredicted RBP15.2■□□□□ 0.02
SMARCD1-201ENST00000381513 TRBV7-9A0A0J9YWB2 115 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 FAM90A27PA6NNH2 459 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 CT45A10P0DMU9 189 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 C1QTNF4Q9BXJ3 329 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 TMEM164Q5U3C3 297 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 PRR7Q8TB68 274 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 TM2D2Q9BX73 214 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 SAA1P0DJI8 122 aaPredicted RBP15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 RRN3P1Q2M238 152 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 PPP1R35Q8TAP8 253 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 PTH2Q96A98 100 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 CXXC4Q9H2H0 198 aa15.19■□□□□ 0.02
SMARCD1-201ENST00000381513 LOC107984156A0A0G2JMH3 177 aa15.18■□□□□ 0.02
SMARCD1-201ENST00000381513 CYB561P49447 251 aa15.18■□□□□ 0.02
SMARCD1-201ENST00000381513 ARL17AQ8IVW1 177 aa15.18■□□□□ 0.02
SMARCD1-201ENST00000381513 FOXC2Q99958 501 aa15.18■□□□□ 0.02
SMARCD1-201ENST00000381513 PRO0461Q9UI25 63 aa15.18■□□□□ 0.02
SMARCD1-201ENST00000381513 TEX29Q8N6K0 151 aa15.18■□□□□ 0.02
SMARCD1-201ENST00000381513 MRPL36Q9P0J6 103 aaKnown RBP15.18■□□□□ 0.02
SMARCD1-201ENST00000381513 TNRC6BQ9UPQ9 1833 aaKnown RBP15.18■□□□□ 0.02
SMARCD1-201ENST00000381513 IGKCP01834 107 aa15.17■□□□□ 0.02
SMARCD1-201ENST00000381513 C10orf55Q5SWW7 151 aa15.17■□□□□ 0.02
SMARCD1-201ENST00000381513 ZNRD1Q9P1U0 126 aa15.17■□□□□ 0.02
SMARCD1-201ENST00000381513 PLXNB1O43157 2135 aa15.17■□□□□ 0.02
SMARCD1-201ENST00000381513 IQCF6A8MYZ5 107 aa15.17■□□□□ 0.02
SMARCD1-201ENST00000381513 MBNL2Q5VZF2 373 aaKnown RBP15.17■□□□□ 0.02
SMARCD1-201ENST00000381513 ZFAND6Q6FIF0 208 aa15.17■□□□□ 0.02
SMARCD1-201ENST00000381513 KLF17Q5JT82 389 aaPredicted RBP15.17■□□□□ 0.02
SMARCD1-201ENST00000381513 ZNF562Q6V9R5 426 aa15.16■□□□□ 0.02
SMARCD1-201ENST00000381513 PRUNE2Q8WUY3 3088 aa15.16■□□□□ 0.02
SMARCD1-201ENST00000381513 PSMB2P49721 201 aa15.16■□□□□ 0.02
SMARCD1-201ENST00000381513 NFE4Q86UQ8 179 aa15.16■□□□□ 0.02
SMARCD1-201ENST00000381513 CEP290O15078 2479 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 NPYP01303 97 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 FHL3Q13643 280 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 PTPRBP23467 1997 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 LEPP41159 167 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 PEAR1Q5VY43 1037 aaPredicted RBP15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 LYZL1Q6UWQ5 148 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 SMRP1Q8NCR6 262 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 HARBI1Q96MB7 349 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 E7EUB6 86 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 CLEC3BP05452 202 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 APELAP0DMC3 54 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms