RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 ZNF414Q96IQ9 312 aa13.42□□□□□ -0.26
RPAIN-203ENST00000381209 SPG11Q96JI7 2443 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 TRAV34A0A0B4J273 112 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 AP4M1O00189 453 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 PHOX2AO14813 284 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 MGST1P10620 155 aaKnown RBP13.41□□□□□ -0.26
RPAIN-203ENST00000381209 PPIFP30405 207 aaKnown RBP13.41□□□□□ -0.26
RPAIN-203ENST00000381209 RAB9AP51151 201 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 TOMM20LQ6UXN7 152 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 CLEC19AQ6UXS0 136 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 SIGLEC15Q6ZMC9 328 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 FAM231DQ6ZW35 169 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 CMTM2Q8TAZ6 248 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 TACC2O95359 2948 aa13.41□□□□□ -0.26
RPAIN-203ENST00000381209 FAM208BQ5VWN6 2430 aa13.4□□□□□ -0.26
RPAIN-203ENST00000381209 TRBV6-1A0A0K0K1D8 114 aa13.4□□□□□ -0.26
RPAIN-203ENST00000381209 RELQ04864 619 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-203ENST00000381209 KRTAP1-3Q8IUG1 177 aa13.4□□□□□ -0.26
RPAIN-203ENST00000381209 OR5R1Q8NH85 324 aa13.4□□□□□ -0.26
RPAIN-203ENST00000381209 Q96MF0 132 aa13.4□□□□□ -0.26
RPAIN-203ENST00000381209 GPR82Q96P67 336 aa13.4□□□□□ -0.26
RPAIN-203ENST00000381209 PSMG3-AS1Q96PY0 264 aa13.4□□□□□ -0.26
RPAIN-203ENST00000381209 ZFAND3Q9H8U3 227 aa13.4□□□□□ -0.26
RPAIN-203ENST00000381209 SLC17A3O00476 420 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 UBE2CO00762 179 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 TRGV3P03979 118 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 BLCAPP62952 87 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 USMG5Q96IX5 58 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 LINC00527Q9UJ94 153 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 ZNF320A2RRD8 509 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BKO60814 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BJP06899 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BOP23527 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BBP33778 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 IER3P46695 156 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BDP58876 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BCP62807 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST2H2BEQ16778 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 RPEL1Q2QD12 228 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-203ENST00000381209 IBA57Q5T440 356 aaKnown RBP13.39□□□□□ -0.27
RPAIN-203ENST00000381209 CYB5R2Q6BCY4 276 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 EXOC3-AS1Q8N2X6 119 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 ARL6IP6Q8N6S5 226 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 FRZBQ92765 325 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BHQ93079 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 C17orf77Q96MU5 243 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BNQ99877 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 HIST1H2BMQ99879 126 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 MLST8Q9BVC4 326 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
RPAIN-203ENST00000381209 GNB4Q9HAV0 340 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 RPH3ALQ9UNE2 315 aa13.39□□□□□ -0.27
RPAIN-203ENST00000381209 LRRK2Q5S007 2527 aa13.38□□□□□ -0.27
RPAIN-203ENST00000381209 ZNF253O75346 499 aa13.38□□□□□ -0.27
RPAIN-203ENST00000381209 LTAP01374 205 aa13.38□□□□□ -0.27
RPAIN-203ENST00000381209 IGHV4-59P01825 116 aa13.38□□□□□ -0.27
RPAIN-203ENST00000381209 PSG9Q00887 426 aa13.38□□□□□ -0.27
RPAIN-203ENST00000381209 TRGC1P0CF51 173 aa13.37□□□□□ -0.27
RPAIN-203ENST00000381209 TPPP2P59282 170 aa13.37□□□□□ -0.27
RPAIN-203ENST00000381209 FABP9Q0Z7S8 132 aa13.37□□□□□ -0.27
RPAIN-203ENST00000381209 SMUG1Q53HV7 270 aa13.37□□□□□ -0.27
RPAIN-203ENST00000381209 OR8I2Q8N0Y5 310 aa13.37□□□□□ -0.27
RPAIN-203ENST00000381209 K7EQM0 130 aa13.36□□□□□ -0.27
RPAIN-203ENST00000381209 IGLV1-40P01703 118 aa13.36□□□□□ -0.27
RPAIN-203ENST00000381209 RPL19P84098 196 aaKnown RBP13.36□□□□□ -0.27
RPAIN-203ENST00000381209 CFHR3Q02985 330 aa13.36□□□□□ -0.27
RPAIN-203ENST00000381209 ACTL10Q5JWF8 245 aa13.36□□□□□ -0.27
RPAIN-203ENST00000381209 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
RPAIN-203ENST00000381209 TMEM75Q8N9X5 138 aa13.36□□□□□ -0.27
RPAIN-203ENST00000381209 NHLRC2Q8NBF2 726 aa13.36□□□□□ -0.27
RPAIN-203ENST00000381209 NOL4LQ96MY1 436 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-203ENST00000381209 AAMDCQ9H7C9 122 aa13.36□□□□□ -0.27
RPAIN-203ENST00000381209 ABCA1O95477 2261 aa13.35□□□□□ -0.27
RPAIN-203ENST00000381209 FBN2P35556 2912 aa13.35□□□□□ -0.27
RPAIN-203ENST00000381209 SERTM2A0A1B0GWG4 89 aa13.35□□□□□ -0.27
RPAIN-203ENST00000381209 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
RPAIN-203ENST00000381209 Q6YL49 198 aa13.35□□□□□ -0.27
RPAIN-203ENST00000381209 GOLT1AQ6ZVE7 132 aa13.35□□□□□ -0.27
RPAIN-203ENST00000381209 ZNF492Q9P255 531 aa13.35□□□□□ -0.27
RPAIN-203ENST00000381209 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
RPAIN-203ENST00000381209 IGHV3-35A0A0C4DH35 117 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 SMIM27A0A1W2PRY6 76 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 CLPSL1A2RUU4 121 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 ZNF705GA8MUZ8 300 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-203ENST00000381209 BUB3O43684 328 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 GATCO43716 136 aaKnown RBP13.34□□□□□ -0.27
RPAIN-203ENST00000381209 IGLV2-11P01706 119 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 HOXA5P20719 270 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 NDUFA6P56556 154 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 Q6ZS46 218 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 Q86TA4 180 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 TMEM183AQ8IXX5 376 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 NUDT10Q8NFP7 164 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 NUDT11Q96G61 164 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 GRAMD2BQ96HH9 432 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 METTL26Q96S19 204 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 PRDM13Q9H4Q3 707 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 SMAD5-AS1Q9Y6J3 95 aa13.34□□□□□ -0.27
RPAIN-203ENST00000381209 A0A087X0K7 114 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms