RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 PRSS53Q2L4Q9 553 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 MORN5Q5VZ52 161 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 TEN1Q86WV5 123 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 FAM57AQ8TBR7 257 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 IGHV1-2P23083 117 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 C5orf64Q2M2E5 130 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 IGHG2P01859 326 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 FAM110AQ9BQ89 295 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 C21orf62Q9NYP8 219 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 A0A0B4J2C4 111 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
CLCN4-202ENST00000380833 INS-IGF2F8WCM5 200 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 INSP01308 110 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 C9JQL5 133 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 LHBP01229 141 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 LINC00158P58513 81 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 LGALS9BQ3B8N2 356 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 LGALS9CQ6DKI2 356 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 SP7Q8TDD2 431 aaPredicted RBP8.88□□□□□ -0.99
CLCN4-202ENST00000380833 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.88□□□□□ -0.99
CLCN4-202ENST00000380833 F2Z2F3 143 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 HAMPP81172 84 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 Q6ZUT4 128 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 TJP1Q07157 1748 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 SLC25A47Q6Q0C1 308 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 BCORQ6W2J9 1755 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 CD28P10747 220 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 ADARB2-AS1A8MUL3 147 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 THBDP07204 575 aa8.88□□□□□ -0.99
CLCN4-202ENST00000380833 RTTNQ86VV8 2226 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 CENPVL3A0A0U1RRI6 287 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 ACP7Q6ZNF0 438 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 Q6ZT83 130 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 A0A087WX48 190 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 ZNF837Q96EG3 531 aaPredicted RBP8.87□□□□□ -0.99
CLCN4-202ENST00000380833 ADAMTSL1Q8N6G6 1762 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 YPEL3P61236 119 aaPredicted RBP8.87□□□□□ -0.99
CLCN4-202ENST00000380833 WFDC2Q14508 124 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 NEU4Q8WWR8 484 aaPredicted RBP8.87□□□□□ -0.99
CLCN4-202ENST00000380833 CACNG8Q8WXS5 425 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 MIA3Q5JRA6 1907 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 LAMB1P07942 1786 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 C3orf22Q8N5N4 141 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 KLHL30-AS1Q8NEE0 82 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 IFI27L2Q9H2X8 130 aa8.87□□□□□ -0.99
CLCN4-202ENST00000380833 SHANK3Q9BYB0 1731 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 TRGV1A0A0A0MS02 117 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 FOXG1P55316 489 aaPredicted RBP8.86□□□□□ -0.99
CLCN4-202ENST00000380833 LINC00477Q96M19 166 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 JPT1Q9UK76 154 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 SCN8AQ9UQD0 1980 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 IGFBP3P17936 291 aaPredicted RBP8.86□□□□□ -0.99
CLCN4-202ENST00000380833 DTX2Q86UW9 622 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 POLR2AP24928 1970 aaKnown RBP8.86□□□□□ -0.99
CLCN4-202ENST00000380833 C17orf98A8MV24 154 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 IGLL5B9A064 214 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 HERVK_113P63121 156 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 TMEM158Q8WZ71 300 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 CKAP5Q14008 2032 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 IGFL4Q6B9Z1 124 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 ZIC4Q8N9L1 334 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 NPIPB13A6NJU9 1138 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 CFHR1Q03591 330 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 HAPLN4Q86UW8 402 aa8.86□□□□□ -0.99
CLCN4-202ENST00000380833 ODF1Q14990 250 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 DIDO1Q9BTC0 2240 aaKnown RBP8.85□□□□□ -0.99
CLCN4-202ENST00000380833 NMSQ5H8A3 153 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 C8orf31Q8N9H6 132 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 A0A096LPF7 62 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 FAM236DA0A1B0GTK5 79 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 FAM236CP0DP71 79 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 RPL15P61313 204 aaKnown RBP8.85□□□□□ -0.99
CLCN4-202ENST00000380833 VMO1Q7Z5L0 202 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 RGPD4Q7Z3J3 1758 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 ZNF138P52744 262 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 DEPPQ9NTK1 212 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 STRCP1A6NGW2 1772 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 RS1O15537 224 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 PSMB8P28062 276 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 MYO16Q9Y6X6 1858 aa8.85□□□□□ -0.99
CLCN4-202ENST00000380833 SLC25A39Q9BZJ4 359 aaPredicted RBP8.85□□□□□ -0.99
CLCN4-202ENST00000380833 WFDC9Q8NEX5 89 aa8.84□□□□□ -0.99
CLCN4-202ENST00000380833 RNASE6Q93091 150 aaKnown RBP8.84□□□□□ -0.99
CLCN4-202ENST00000380833 PILRAQ9UKJ1 303 aa8.84□□□□□ -0.99
CLCN4-202ENST00000380833 TM2D1Q9BX74 207 aa8.84□□□□□ -0.99
CLCN4-202ENST00000380833 FOXF2Q12947 444 aa8.84□□□□□ -0.99
CLCN4-202ENST00000380833 FAM166AQ6J272 317 aa8.84□□□□□ -0.99
CLCN4-202ENST00000380833 SPTBP11277 2137 aa8.84□□□□□ -0.99
CLCN4-202ENST00000380833 EFNB3Q15768 340 aa8.84□□□□□ -0.99
CLCN4-202ENST00000380833 ABCA3Q99758 1704 aa8.84□□□□□ -0.99
CLCN4-202ENST00000380833 ZNF474Q6S9Z5 364 aaPredicted RBP8.84□□□□□ -1
CLCN4-202ENST00000380833 OSR1Q8TAX0 266 aaPredicted RBP8.84□□□□□ -1
CLCN4-202ENST00000380833 ESPL1Q14674 2120 aa8.83□□□□□ -1
CLCN4-202ENST00000380833 PAX1P15863 534 aa8.83□□□□□ -1
CLCN4-202ENST00000380833 COA6Q5JTJ3 125 aaKnown RBP8.83□□□□□ -1
CLCN4-202ENST00000380833 IMMP1LQ96LU5 166 aa8.83□□□□□ -1
CLCN4-202ENST00000380833 FBLN5Q9UBX5 448 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms