RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 C5orf63A6NC05 138 aa13.95□□□□□ -0.18
SNAPC3-202ENST00000380821 FAM223BA6NKX1 122 aa13.95□□□□□ -0.18
SNAPC3-202ENST00000380821 E9PLN8 166 aa13.95□□□□□ -0.18
SNAPC3-202ENST00000380821 M0R1W7 72 aa13.95□□□□□ -0.18
SNAPC3-202ENST00000380821 FAM223AQ8IWN6 122 aa13.95□□□□□ -0.18
SNAPC3-202ENST00000380821 PDE6HQ13956 83 aa13.95□□□□□ -0.18
SNAPC3-202ENST00000380821 LYNX1G3V0Z9 82 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 LYNX1P0DP58 116 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 AMN1Q8IY45 258 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 ZCCHC24Q8N2G6 241 aaKnown RBP13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 TIMM21Q9BVV7 248 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 BUB1B-PAK6H3BSN5 160 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 RPL36AP83881 106 aaKnown RBP13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 WFDC12Q8WWY7 111 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 RPL36ALQ969Q0 106 aaKnown RBP13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 PFN1P07737 140 aaKnown RBP13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 SRD5A1P18405 259 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 SHANK2-AS3Q9BTD1 123 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 LIME1Q9H400 295 aa13.94□□□□□ -0.18
SNAPC3-202ENST00000380821 GAGE1Q13065 139 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 SMIM20Q8N5G0 67 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 DNAJC30Q96LL9 226 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 PAX4O43316 350 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 Q8TAT8 98 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 JPT2Q9H910 190 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 IGHV2-70P01814 119 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 SELLP14151 372 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 C5orf64Q2M2E5 130 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 ZNF672Q499Z4 452 aaPredicted RBP13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 NEGR1Q7Z3B1 354 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 SLX1AQ9BQ83 275 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 C1orf122Q6ZSJ8 110 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 SIGLEC9Q9Y336 463 aa13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 SRRM4A7MD48 611 aaKnown RBP13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 TSSC4Q9Y5U2 329 aaPredicted RBP13.93□□□□□ -0.18
SNAPC3-202ENST00000380821 C9JQL5 133 aa13.92□□□□□ -0.18
SNAPC3-202ENST00000380821 C18orf32Q8TCD1 76 aa13.92□□□□□ -0.18
SNAPC3-202ENST00000380821 LILRA1O75019 489 aa13.92□□□□□ -0.18
SNAPC3-202ENST00000380821 ERCC8Q13216 396 aa13.92□□□□□ -0.18
SNAPC3-202ENST00000380821 SNHG12Q9BXW3 62 aa13.92□□□□□ -0.18
SNAPC3-202ENST00000380821 C9orf118A6NHY6 69 aa13.92□□□□□ -0.18
SNAPC3-202ENST00000380821 SMKR1H3BMG3 65 aa13.92□□□□□ -0.18
SNAPC3-202ENST00000380821 LTBRP36941 435 aa13.92□□□□□ -0.18
SNAPC3-202ENST00000380821 PRSS46E5RG02 174 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 PRB4P10163 310 aaPredicted RBP13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 DSCR9P59020 149 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 Q6ZRM9 215 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 C17orf82Q86X59 251 aaPredicted RBP13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 CRIPAKQ8N1N5 446 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 C14orf178Q8N769 122 aaPredicted RBP13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 USMG5Q96IX5 58 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 SPANXDQ9BXN6 97 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 TRAV8-3A0A0A6YYJ7 113 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 TRAV40A0A0B4J280 105 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 CDKN1BP46527 198 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 LAMTOR3Q9UHA4 124 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 TMEM141Q96I45 108 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 ZNF581Q9P0T4 197 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 IGKV1D-17A0A075B6S4 117 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 KLF12Q9Y4X4 402 aa13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 KIAA0100Q14667 2235 aaKnown RBP13.91□□□□□ -0.18
SNAPC3-202ENST00000380821 VWC2LB2RUY7 222 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 C5orf24Q7Z6I8 188 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 VGLL1Q99990 258 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 CNTRLQ7Z7A1 2325 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 LY6G5BQ8NDX9 201 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 IGHV3-73A0A0B4J1V6 119 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 FHL1Q13642 323 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 MESP1Q9BRJ9 268 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 C9JAW5 83 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 ASCC3Q8N3C0 2202 aaKnown RBP13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 AZU1P20160 251 aa13.9□□□□□ -0.18
SNAPC3-202ENST00000380821 SIP14410 1827 aa13.89□□□□□ -0.19
SNAPC3-202ENST00000380821 B3GALT5-AS1P59052 145 aa13.89□□□□□ -0.19
SNAPC3-202ENST00000380821 C20orf204Q6ZNR8 217 aa13.89□□□□□ -0.19
SNAPC3-202ENST00000380821 Q8N8P6 123 aa13.89□□□□□ -0.19
SNAPC3-202ENST00000380821 TRBV20-1A0A075B6N2 111 aa13.89□□□□□ -0.19
SNAPC3-202ENST00000380821 KLRD1Q13241 179 aa13.89□□□□□ -0.19
SNAPC3-202ENST00000380821 TRPT1Q86TN4 253 aaKnown RBP13.89□□□□□ -0.19
SNAPC3-202ENST00000380821 H3BMM0 161 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 MMP23AO75900 390 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 GAGE2AQ6NT46 116 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 UBE2WQ96B02 151 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 ARMS2P0C7Q2 107 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 B5MCH6 92 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 STPG4Q8N801 248 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 SMIM27A0A1W2PRY6 76 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 KLHDC3Q9BQ90 382 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 PRDM6Q9NQX0 595 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 GREB1Q4ZG55 1949 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 IGHV2-5P01817 119 aa13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 YPEL3P61236 119 aaPredicted RBP13.88□□□□□ -0.19
SNAPC3-202ENST00000380821 F8W1H4 67 aa13.87□□□□□ -0.19
SNAPC3-202ENST00000380821 EFNA4P52798 201 aa13.87□□□□□ -0.19
SNAPC3-202ENST00000380821 MCRIP2Q9BUT9 160 aaKnown RBP13.87□□□□□ -0.19
SNAPC3-202ENST00000380821 K7EP34 96 aa13.87□□□□□ -0.19
SNAPC3-202ENST00000380821 SCN2AQ99250 2005 aa13.87□□□□□ -0.19
SNAPC3-202ENST00000380821 INSP01308 110 aa13.87□□□□□ -0.19
SNAPC3-202ENST00000380821 IGLC2P0DOY2 106 aa13.87□□□□□ -0.19
SNAPC3-202ENST00000380821 IGLC3P0DOY3 106 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms