RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 SIGLEC15Q6ZMC9 328 aa5.34□□□□□ -1.56
RIPK1-202ENST00000380409 ZNF826PQ6ZT77 177 aa5.34□□□□□ -1.56
RIPK1-202ENST00000380409 OR9G1Q8NH87 305 aa5.34□□□□□ -1.56
RIPK1-202ENST00000380409 OR2H1Q9GZK4 316 aa5.34□□□□□ -1.56
RIPK1-202ENST00000380409 LIN7CQ9NUP9 197 aaKnown RBP5.34□□□□□ -1.56
RIPK1-202ENST00000380409 DLL3Q9NYJ7 618 aa5.34□□□□□ -1.56
RIPK1-202ENST00000380409 ATMQ13315 3056 aa5.34□□□□□ -1.56
RIPK1-202ENST00000380409 TRBV6-6A0A0A6YYG2 114 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 NEURL1O76050 574 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 MT-CO3P00414 261 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 APELAP0DMC3 54 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 GCHFRP30047 84 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 RBM11P57052 281 aaKnown RBP5.33□□□□□ -1.56
RIPK1-202ENST00000380409 MZT1Q08AG7 82 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 GATD1Q8NB37 220 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 AJUBAQ96IF1 538 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 LINC01587Q99440 93 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 SCNM1Q9BWG6 230 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.33□□□□□ -1.56
RIPK1-202ENST00000380409 TMEM8BA6NDV4 472 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 PRSS29PA6NIE9 313 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 APOA2P02652 100 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 CFHR1Q03591 330 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 SLC25A53Q5H9E4 307 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 IBA57Q5T440 356 aaKnown RBP5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A10PA6NDY2 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A20PA6NIJ5 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A7PA6NKC0 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 C15orf62A8K5M9 175 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A22PA8MWA6 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A12PA8MX19 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A5PA8MXJ8 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A23PA8MXZ1 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 K7ERJ3 54 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A15PP0C7V4 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A13PP0C7W8 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A14PP0C7W9 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 FAM90A24PP0C7X0 464 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 HLA-DRB4P13762 266 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 ERVK11-1P61568 191 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 LGALS9BQ3B8N2 356 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 LGALS9CQ6DKI2 356 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 PRELID3AQ96N28 172 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 ZNF71Q9NQZ8 489 aaPredicted RBP5.33□□□□□ -1.56
RIPK1-202ENST00000380409 LSM4Q9Y4Z0 139 aaKnown RBP5.33□□□□□ -1.56
RIPK1-202ENST00000380409 HLA-DRB4X5D2U9 266 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 NAV2Q8IVL1 2488 aa5.33□□□□□ -1.56
RIPK1-202ENST00000380409 MPV17P39210 176 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 HES1Q14469 280 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 ZFAND6Q6FIF0 208 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 SRXN1Q9BYN0 137 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 DEPPQ9NTK1 212 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 KALRNO60229 2985 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 USP24Q9UPU5 2620 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 NBEAQ8NFP9 2946 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 TCRBV4S1A1TA0A5B7 111 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 APOMO95445 188 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 CT45A10P0DMU9 189 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 GAGE13Q4V321 117 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 PQLC2Q6ZP29 291 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 SSX8Q7RTT4 187 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 RBMXL3Q8N7X1 1067 aaKnown RBP5.32□□□□□ -1.56
RIPK1-202ENST00000380409 ZNF503Q96F45 646 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 ADTRPQ96IZ2 230 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 MGST2Q99735 147 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 MRPL32Q9BYC8 188 aaKnown RBP5.32□□□□□ -1.56
RIPK1-202ENST00000380409 IGHV3OR15-7A0A075B7D8 119 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 PRRG2O14669 202 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 KLK10O43240 276 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 MPDU1O75352 247 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 APOHP02749 345 aaPredicted RBP5.32□□□□□ -1.56
RIPK1-202ENST00000380409 PMS2CLQ68D20 193 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 SSMEM1Q8WWF3 244 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 DNAJC30Q96LL9 226 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 IL36RNQ9UBH0 155 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 SIGLEC9Q9Y336 463 aa5.32□□□□□ -1.56
RIPK1-202ENST00000380409 LRRK2Q5S007 2527 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 SMIM9A6NGZ8 99 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 SLC25A5P05141 298 aaKnown RBP5.31□□□□□ -1.56
RIPK1-202ENST00000380409 MYOD1P15172 320 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 COL8A2P25067 703 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 G6PCP35575 357 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 FAM27BQ5VT28 67 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 S1PR3Q99500 378 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 TMEM126AQ9H061 195 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 UBTD1Q9HAC8 227 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 ZNF331Q9NQX6 463 aaPredicted RBP5.31□□□□□ -1.56
RIPK1-202ENST00000380409 ZNF355PQ9NSJ1 428 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 HECTD1Q9ULT8 2610 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 PROCRQ9UNN8 238 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 EFNA2O43921 213 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 NDUFS7O75251 213 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 TAS2R45P59539 299 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 SRSF2Q01130 221 aaKnown RBP5.31□□□□□ -1.56
RIPK1-202ENST00000380409 MDP1Q86V88 176 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 PCP2Q8IVA1 136 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 ZMAT4Q9H898 229 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 DKK4Q9UBT3 224 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 PSG5Q15238 335 aa5.31□□□□□ -1.56
RIPK1-202ENST00000380409 OXLD1Q5BKU9 147 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms