RNA–Protein interactions for RNA: ENST00000379803.5

SIN3B-202, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIN3B, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-202ENST00000379803 TMEM86BQ8N661 226 aa12.6□□□□□ -0.39
SIN3B-202ENST00000379803 WFDC12Q8WWY7 111 aa12.6□□□□□ -0.39
SIN3B-202ENST00000379803 GBF1Q92538 1859 aa12.6□□□□□ -0.39
SIN3B-202ENST00000379803 TRBV7-9A0A0J9YWB2 115 aa12.6□□□□□ -0.39
SIN3B-202ENST00000379803 TEX36Q5VZQ5 186 aa12.6□□□□□ -0.39
SIN3B-202ENST00000379803 NDPQ00604 133 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 TREML4Q6UXN2 200 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 NDUFB8O95169 186 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 RPLP1P05386 114 aaKnown RBP12.59□□□□□ -0.39
SIN3B-202ENST00000379803 SOD3P08294 240 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 CD28P10747 220 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 C18orf15Q96N68 181 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 CLDN16Q9Y5I7 305 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 HIGD1CA8MV81 97 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 OSTCQ9NRP0 149 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 LMO1P25800 156 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 SEC11AP67812 179 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 FAM90A2PQ658T7 463 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 ZNF407Q9C0G0 2248 aa12.59□□□□□ -0.39
SIN3B-202ENST00000379803 IGKV1D-8A0A087WSZ0 117 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 SCGB1A1P11684 91 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 VPREB3Q9UKI3 123 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 LINC00311Q8N616 119 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 TSSC4Q9Y5U2 329 aaPredicted RBP12.58□□□□□ -0.4
SIN3B-202ENST00000379803 LOXP28300 417 aaPredicted RBP12.58□□□□□ -0.4
SIN3B-202ENST00000379803 KAAG1Q9UBP8 84 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 TRAV12-3A0A0B4J271 114 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 HOXA3O43365 443 aaPredicted RBP12.58□□□□□ -0.4
SIN3B-202ENST00000379803 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 CKS1BP61024 79 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 FOXC2Q99958 501 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 SCRT1Q9BWW7 348 aa12.58□□□□□ -0.4
SIN3B-202ENST00000379803 DAZAP2Q15038 168 aaPredicted RBP12.57□□□□□ -0.4
SIN3B-202ENST00000379803 LHFPL4Q7Z7J7 247 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 GGTLC1Q9BX51 225 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 COL4A4P53420 1690 aaPredicted RBP12.57□□□□□ -0.4
SIN3B-202ENST00000379803 FABP2P12104 132 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 SLC17A3O00476 420 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 APOMO95445 188 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 CBLN1P23435 193 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 OR5A1Q8NGJ0 315 aa12.57□□□□□ -0.4
SIN3B-202ENST00000379803 MPDZO75970 2070 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 NPIPB5A8MRT5 1133 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 PSG3Q16557 428 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 TMEM249Q2WGJ8 235 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 FNDC10F2Z333 226 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 IGHV2-5P01817 119 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 WT1P19544 449 aaPredicted RBP12.56□□□□□ -0.4
SIN3B-202ENST00000379803 HAPLN4Q86UW8 402 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 LHFPL1Q86WI0 220 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 JKAMPQ9P055 326 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 TP53BP1Q12888 1972 aaPredicted RBP12.56□□□□□ -0.4
SIN3B-202ENST00000379803 KIAA1671Q9BY89 1806 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 RMI2Q96E14 147 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 NOTCH3Q9UM47 2321 aa12.56□□□□□ -0.4
SIN3B-202ENST00000379803 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
SIN3B-202ENST00000379803 SPATA45Q537H7 98 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 TTC9CQ8N5M4 171 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 DKK4Q9UBT3 224 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 F5H768 121 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 H3BUA1 57 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 TMEM158Q8WZ71 300 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 IGKV2-40A0A087WW87 121 aaPredicted RBP12.55□□□□□ -0.4
SIN3B-202ENST00000379803 RHODO00212 210 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 LDLRAD4O15165 306 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 IGKV2D-40P01614 121 aaPredicted RBP12.55□□□□□ -0.4
SIN3B-202ENST00000379803 MRPL27Q9P0M9 148 aaKnown RBP12.55□□□□□ -0.4
SIN3B-202ENST00000379803 UQCR10Q9UDW1 63 aa12.55□□□□□ -0.4
SIN3B-202ENST00000379803 IL17RELQ6ZVW7 336 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 SCN8AQ9UQD0 1980 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 PDE6HQ13956 83 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 RNF182Q8N6D2 247 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 FER1L5A0AVI2 2057 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 LINC00473A8K010 186 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 NDUFA4O00483 81 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 YPEL3P61236 119 aaPredicted RBP12.54□□□□□ -0.4
SIN3B-202ENST00000379803 TCTEX1D4Q5JR98 221 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 MORN3Q6PF18 240 aaPredicted RBP12.54□□□□□ -0.4
SIN3B-202ENST00000379803 Q6ZR03 302 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 NDUFAF3Q9BU61 184 aa12.54□□□□□ -0.4
SIN3B-202ENST00000379803 ZNF815PA8K554 130 aa12.53□□□□□ -0.4
SIN3B-202ENST00000379803 STAG3L3P0CL85 134 aa12.53□□□□□ -0.4
SIN3B-202ENST00000379803 PPIFP30405 207 aaKnown RBP12.53□□□□□ -0.4
SIN3B-202ENST00000379803 FXYD7P58549 80 aa12.53□□□□□ -0.4
SIN3B-202ENST00000379803 RIPPLY3P57055 190 aa12.53□□□□□ -0.4
SIN3B-202ENST00000379803 C1orf194Q5T5A4 169 aa12.53□□□□□ -0.4
SIN3B-202ENST00000379803 C5orf63A6NC05 138 aa12.53□□□□□ -0.4
SIN3B-202ENST00000379803 TRAV3A0A0B4J244 114 aa12.53□□□□□ -0.4
SIN3B-202ENST00000379803 RNASE2P10153 161 aaKnown RBP12.53□□□□□ -0.4
SIN3B-202ENST00000379803 SPATA31B1PQ5VZV4 182 aa12.53□□□□□ -0.4
SIN3B-202ENST00000379803 SHISA9B4DS77 424 aa12.52□□□□□ -0.4
SIN3B-202ENST00000379803 LINC01559Q495D7 138 aa12.52□□□□□ -0.4
SIN3B-202ENST00000379803 C1QL4Q86Z23 238 aa12.52□□□□□ -0.4
SIN3B-202ENST00000379803 C9orf66Q5T8R8 295 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms