RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 TRGV9Q99603 122 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 NRTNQ99748 197 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 TRAV5A0A0B4J249 113 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 TMEM219Q86XT9 240 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 LIMS1P48059 325 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 HSD52Q0P140 79 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 FAM19A2Q8N3H0 131 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 SSBP2P81877 361 aaPredicted RBP9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 PSG8Q9UQ74 426 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 CSRP1P21291 193 aaKnown RBP9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 LY6G5BQ8NDX9 201 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 GPHA2Q96T91 129 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 IFI27L1Q96BM0 104 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 IGLV1-36A0A0B4J1U3 117 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 FOXL1Q12952 345 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 C8orf82Q6P1X6 216 aaPredicted RBP9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 GATA2P23769 480 aaPredicted RBP9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 TM2D1Q9BX74 207 aa9.32□□□□□ -0.92
PTCHD1-201ENST00000379361 FXYD7P58549 80 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 PLAC1Q9HBJ0 212 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 BPTFQ12830 3046 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 ZNF660Q6AZW8 331 aaPredicted RBP9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 GNG5P63218 68 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 CELA3BP08861 270 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 CRYBA2P53672 197 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 ZNF497Q6ZNH5 498 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 CENPVL1A0A0U1RR11 272 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 EFNA4P52798 201 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 LY6DQ14210 128 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 CHD8Q9HCK8 2581 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 ANXA2RQ3ZCQ2 193 aa9.31□□□□□ -0.92
PTCHD1-201ENST00000379361 ZNF876PQ49A33 203 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 PTPRSQ13332 1948 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 RFPL3SP0C7P2 107 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 SELLP14151 372 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 CCL20P78556 96 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 VWC2Q2TAL6 325 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 C4orf48Q5BLP8 95 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 RHODO00212 210 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 FCN3O75636 299 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 CSTL1Q9H114 145 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 CHCHD2Q9Y6H1 151 aaPredicted RBP9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 NCR2O95944 276 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 IL18BPO95998 194 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 CTSBP07858 339 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 RIPPLY3P57055 190 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
PTCHD1-201ENST00000379361 C17orf98A8MV24 154 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 TRAV13-1A0A0B4J241 112 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 M0R1W7 72 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 CRLF1O75462 422 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 UBL5Q9BZL1 73 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 MLNRO43193 412 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 IGHV3-53P01767 116 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 TAL2Q16559 108 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 RNF5Q99942 180 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 TRAV13-2A0A0B4J235 113 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 C9orf106Q8NAJ2 232 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 KLF17Q5JT82 389 aaPredicted RBP9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 TSKUQ8WUA8 353 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 CD160O95971 181 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 CCL3L1P16619 93 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 TMEM52Q8NDY8 209 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 RNASE7Q9H1E1 156 aaKnown RBP9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 IL17RELQ6ZVW7 336 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 WFDC12Q8WWY7 111 aa9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 REPIN1Q9BWE0 567 aaKnown RBP9.29□□□□□ -0.92
PTCHD1-201ENST00000379361 H3BUX3 64 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 MORN2Q502X0 79 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 MIXL1Q9H2W2 232 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 PRSS23O95084 383 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 Q5PR19 223 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 SP7Q8TDD2 431 aaPredicted RBP9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 NDUFAF3Q9BU61 184 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 SCRT2Q9NQ03 307 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 PLA2G10O15496 165 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 SLC25A39Q9BZJ4 359 aaPredicted RBP9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 TRAV25A0A0B4J276 109 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 PQLC2LA1A4F0 135 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 CLPSL1A2RUU4 121 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 TMEM14DPA8MWL7 114 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 DAZ1Q9NQZ3 744 aaKnown RBP9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 OCIAD2Q56VL3 154 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 FAM201AQ5SY85 155 aa9.28□□□□□ -0.92
PTCHD1-201ENST00000379361 UBE2BP63146 152 aa9.27□□□□□ -0.92
PTCHD1-201ENST00000379361 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.92
PTCHD1-201ENST00000379361 ZNF138P52744 262 aa9.27□□□□□ -0.92
PTCHD1-201ENST00000379361 OSTCQ9NRP0 149 aa9.27□□□□□ -0.92
PTCHD1-201ENST00000379361 TIMP3P35625 211 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 RPL15P61313 204 aaKnown RBP9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 NPIPB5A8MRT5 1133 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 ZNF474Q6S9Z5 364 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms