RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 LINC01619G3V211 115 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 ASCL5Q7RTU5 278 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 CNEP1R1Q8N9A8 125 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 SRSF12Q8WXF0 261 aaKnown RBP6.54□□□□□ -1.36
PTPRR-203ENST00000378778 RITA1Q96K30 269 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 FZR1Q9UM11 496 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 A0A1W2PPI3 338 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 IGHV3-7P01780 117 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 TNFAIP6P98066 277 aaPredicted RBP6.54□□□□□ -1.36
PTPRR-203ENST00000378778 RNF5Q99942 180 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 MUC6Q6W4X9 2439 aa6.54□□□□□ -1.36
PTPRR-203ENST00000378778 TRBV19A0A075B6N1 114 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 A0A096LNJ9 63 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 CEACAM4O75871 244 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 ATP5LO75964 103 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 TNFRSF1AP19438 455 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 EVI2AP22794 236 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 S100A7P31151 101 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 RPL27AP46776 148 aaKnown RBP6.53□□□□□ -1.36
PTPRR-203ENST00000378778 RIPPLY3P57055 190 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
PTPRR-203ENST00000378778 LCNL1Q6ZST4 164 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 PRNTQ86SH4 94 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 VGLL1Q99990 258 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 THYN1Q9P016 225 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 PSG8Q9UQ74 426 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 F11RQ9Y624 299 aaKnown RBP6.53□□□□□ -1.36
PTPRR-203ENST00000378778 DNAJC13O75165 2243 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 CSN3P07498 182 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 GOLT1AQ6ZVE7 132 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 C9orf106Q8NAJ2 232 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 SHANK2-AS3Q9BTD1 123 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 NGBQ9NPG2 151 aa6.53□□□□□ -1.36
PTPRR-203ENST00000378778 NXT2Q9NPJ8 142 aaKnown RBP6.53□□□□□ -1.36
PTPRR-203ENST00000378778 NCR2O95944 276 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 CRYGBP07316 175 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 COL8A2P25067 703 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.37
PTPRR-203ENST00000378778 UQCRFS1P47985 274 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 HOXA4Q00056 320 aaPredicted RBP6.52□□□□□ -1.37
PTPRR-203ENST00000378778 ZNF474Q6S9Z5 364 aaPredicted RBP6.52□□□□□ -1.37
PTPRR-203ENST00000378778 PRSS57Q6UWY2 283 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 NUP37Q8NFH4 326 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 ZNF502Q8TBZ5 544 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 ZC2HC1AQ96GY0 325 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 CACNA1GO43497 2377 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 DSCAMO60469 2012 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 XIRP2A4UGR9 3374 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 MBD3L4A6NDZ8 208 aaPredicted RBP6.52□□□□□ -1.37
PTPRR-203ENST00000378778 MBD3L3A6NE82 208 aaPredicted RBP6.52□□□□□ -1.37
PTPRR-203ENST00000378778 MBD3L5A6NJ08 208 aaPredicted RBP6.52□□□□□ -1.37
PTPRR-203ENST00000378778 H3BRN7 92 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 ZNF138P52744 262 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 CACNG7P62955 275 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 TCTEX1D4Q5JR98 221 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 UTF1Q5T230 341 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 IGFL2Q6UWQ7 119 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 MBD3L2Q8NHZ7 208 aaPredicted RBP6.52□□□□□ -1.37
PTPRR-203ENST00000378778 RND1Q92730 232 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 INSIG2Q9Y5U4 225 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 RAI1Q7Z5J4 1906 aaPredicted RBP6.52□□□□□ -1.37
PTPRR-203ENST00000378778 DOCK7Q96N67 2140 aa6.52□□□□□ -1.37
PTPRR-203ENST00000378778 H0Y8G0 127 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 SPRY3O43610 288 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 IGHV1-46P01743 117 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 FCER1GP30273 86 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 CLEC2AQ6UVW9 174 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 ARPC1AQ92747 370 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 ZNF48Q96MX3 618 aaPredicted RBP6.51□□□□□ -1.37
PTPRR-203ENST00000378778 CCL13Q99616 98 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 VCX2Q9H322 139 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 MRPL36Q9P0J6 103 aaKnown RBP6.51□□□□□ -1.37
PTPRR-203ENST00000378778 TRAV17A0A0B4J275 112 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 D6R8Y8 96 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 E7EUB6 86 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 E9PLD3 99 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 NDUFS7O75251 213 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 PLAUP00749 431 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 PLA2G2CQ5R387 149 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 SIGLEC15Q6ZMC9 328 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 RASL11BQ9BPW5 248 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 CNFNQ9BYD5 112 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 RAB1BQ9H0U4 201 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 MAP1LC3AQ9H492 121 aa6.51□□□□□ -1.37
PTPRR-203ENST00000378778 LAMTOR5O43504 91 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 PPIAL4GP0DN37 164 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 MSMPQ1L6U9 139 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 MRGPRG-AS1Q2M3A8 158 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 MRPL51Q4U2R6 128 aaKnown RBP6.5□□□□□ -1.37
PTPRR-203ENST00000378778 DHRS13Q6UX07 377 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 ATP6V0E2Q8NHE4 81 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 AAMDCQ9H7C9 122 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 PRR14LQ5THK1 2151 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 PATE3B3GLJ2 98 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms