RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TRAV3A0A0B4J244 114 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 E9PLN8 166 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 IGHV3-23P01764 117 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 PAX9P55771 341 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 ATP5J2P56134 94 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 LY6EQ16553 131 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 C5orf24Q7Z6I8 188 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 RPRMLQ8N4K4 120 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 MDS2Q8NDY4 140 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 NUP35Q8NFH5 326 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 APOMO95445 188 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 PSG1P11464 419 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 Q0VFX4 171 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 C10orf55Q5SWW7 151 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 FAM71F2Q6NXP2 309 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 CYSLTR1Q9Y271 337 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 PIEZO2Q9H5I5 2752 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 PCNX1Q96RV3 2341 aa6.87□□□□□ -1.31
VPS36-201ENST00000378060 OOSP1A8MZH6 123 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 NPFFO15130 113 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 LILRA1O75019 489 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 DNAL4O96015 105 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 IGKCP01834 107 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 ARL6IP6Q8N6S5 226 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 ABHD17AQ96GS6 310 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 DMRTA2Q96SC8 542 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 FNDC4Q9H6D8 234 aaPredicted RBP6.86□□□□□ -1.31
VPS36-201ENST00000378060 MOB4Q9Y3A3 225 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 TIMM23O14925 209 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 NDUFS6O75380 124 aaKnown RBP6.86□□□□□ -1.31
VPS36-201ENST00000378060 IGHV2-70P01814 119 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 SELLP14151 372 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 SUMO2P61956 95 aaKnown RBP6.86□□□□□ -1.31
VPS36-201ENST00000378060 SLC25A39Q9BZJ4 359 aaPredicted RBP6.86□□□□□ -1.31
VPS36-201ENST00000378060 METRNQ9UJH8 293 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 PMS2P5A8MQ11 134 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 H3BRM9 83 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 NDUFA3O95167 84 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 SCGB1A1P11684 91 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 DUX5Q96PT3 197 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 NCOR1P1Q9H4R4 102 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 BEX4Q9NWD9 120 aaPredicted RBP6.86□□□□□ -1.31
VPS36-201ENST00000378060 RELNP78509 3460 aa6.86□□□□□ -1.31
VPS36-201ENST00000378060 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.85□□□□□ -1.31
VPS36-201ENST00000378060 FAM231BA6NCW3 169 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.85□□□□□ -1.31
VPS36-201ENST00000378060 IGHV1-8P0DP01 117 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 RNASE2P10153 161 aaKnown RBP6.85□□□□□ -1.31
VPS36-201ENST00000378060 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 ZNF418Q8TF45 676 aaPredicted RBP6.85□□□□□ -1.31
VPS36-201ENST00000378060 MRAP2Q96G30 205 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 MEGF9Q9H1U4 602 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 IGHV3-66A0A0C4DH42 116 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 H0YJW9 148 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 MLNRO43193 412 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 DKK1O94907 266 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 CSRP1P21291 193 aaKnown RBP6.85□□□□□ -1.31
VPS36-201ENST00000378060 RHOGP84095 191 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 LYPD6BQ8NI32 183 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 PCSK5Q92824 1860 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 IGKV1D-17A0A075B6S4 117 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 A6NNC1 897 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 TOMM40O96008 361 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 IGHG3P01860 377 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 TDGF1P3P51864 188 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 YPEL3P61236 119 aaPredicted RBP6.85□□□□□ -1.31
VPS36-201ENST00000378060 TMEM200BQ69YZ2 307 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 ZCCHC24Q8N2G6 241 aaKnown RBP6.85□□□□□ -1.31
VPS36-201ENST00000378060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.85□□□□□ -1.318e-10■■■■■ 38.5
VPS36-201ENST00000378060 CACNA1AO00555 2505 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 IGHV3OR16-8A0A075B7F1 116 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 IGHV2-26A0A0B4J1V2 119 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 TMEM262E9PQX1 116 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 TMEM178BH3BS89 294 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 EMP1P54849 157 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 LCN12Q6JVE5 192 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 ZNF479Q96JC4 524 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 VKORC1Q9BQB6 163 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 GFRA4Q9GZZ7 299 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 LIME1Q9H400 295 aa6.85□□□□□ -1.31
VPS36-201ENST00000378060 NPIPB5A8MRT5 1133 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 OVOL1O14753 267 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 IGLV3-1P01715 115 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 MYOD1P15172 320 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 SRSF8Q9BRL6 282 aaKnown RBP6.84□□□□□ -1.31
VPS36-201ENST00000378060 DOCK10Q96BY6 2186 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 KALRNO60229 2985 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 ABCA4P78363 2273 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 HOXA3O43365 443 aaPredicted RBP6.84□□□□□ -1.31
VPS36-201ENST00000378060 SAMD5Q5TGI4 173 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 CENPVQ7Z7K6 275 aaPredicted RBP6.84□□□□□ -1.31
VPS36-201ENST00000378060 NUP210LQ5VU65 1888 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 MBD3L4A6NDZ8 208 aaPredicted RBP6.84□□□□□ -1.31
VPS36-201ENST00000378060 MBD3L3A6NE82 208 aaPredicted RBP6.84□□□□□ -1.31
VPS36-201ENST00000378060 MBD3L5A6NJ08 208 aaPredicted RBP6.84□□□□□ -1.31
VPS36-201ENST00000378060 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 CT83Q5H943 113 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 MBD3L2Q8NHZ7 208 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms