RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 FGF16O43320 207 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 IGKV1-39P01597 117 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 IGKV1D-39P04432 117 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 PPIFP30405 207 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 SPATA31B1PQ5VZV4 182 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 UQCC3Q6UW78 93 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 TXN2Q99757 166 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 VSIRQ9H7M9 311 aa6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 SEPSECSQ9HD40 501 aaKnown RBP6.75□□□□□ -1.33
CRNKL1-202ENST00000377340 LOC389332A0A1B0GUA5 103 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 OVOL1O14753 267 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 LY6G6DO95868 133 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 IGHV4-31P0DP07 118 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 RPL29P47914 159 aaKnown RBP6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 FOXL1Q12952 345 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 TCTEX1D4Q5JR98 221 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 DPPA3Q6W0C5 159 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 AKAP13Q12802 2813 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 FLNAP21333 2647 aaKnown RBP6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 EYSQ5T1H1 3165 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 C20orf202A1L168 122 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 CD7P09564 240 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 FCER1GP30273 86 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 ZNF56Q15929 161 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 CENPWQ5EE01 88 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 NEU1Q99519 415 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 LINC01619G3V211 115 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 M0R3E3 92 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 SAPCD1Q5SSQ6 148 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 PARLQ9H300 379 aa6.74□□□□□ -1.33
CRNKL1-202ENST00000377340 SCO2A0A1W2PP80 73 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 FAM223BA6NKX1 122 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 PNRC1Q12796 327 aaPredicted RBP6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 FAM223AQ8IWN6 122 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 WFDC1Q9HC57 220 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 UTF1Q5T230 341 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 SYT8Q8NBV8 401 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 PRO1933Q9H354 126 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 NDUFA4L2Q9NRX3 87 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 LAMA1P25391 3075 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 CELSR3Q9NYQ7 3312 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 FRYLO94915 3013 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 TMEM14BQ9NUH8 114 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 GOLT1BQ9Y3E0 138 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 PEX7O00628 323 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 ZNF253O75346 499 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 HIST2H2BDQ6DRA6 164 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 TOMM20LQ6UXN7 152 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 TMEM14EPQ6UXP3 125 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 LRRC75A-AS1Q8N1F1 130 aa6.73□□□□□ -1.33
CRNKL1-202ENST00000377340 IGKV2-40A0A087WW87 121 aaPredicted RBP6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 NPIPB5A8MRT5 1133 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 TMEM50AO95807 157 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 IGKV2D-40P01614 121 aaPredicted RBP6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 CFPP27918 469 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 CBLN2Q8IUK8 224 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 CLRN3Q8NCR9 226 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 MGST2Q99735 147 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 ASCL2Q99929 193 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 HSPB9Q9BQS6 159 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 SLC50A1Q9BRV3 221 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 CCL24O00175 119 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 SIRPDQ9H106 197 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 XCL2Q9UBD3 114 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 TMEM262E9PQX1 116 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 PRSS1P07477 247 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 ELANEP08246 267 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 RNF212Q495C1 297 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 C11orf71Q6IPW1 123 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 Q8TAT8 98 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 HIST1H2BAQ96A08 127 aa6.72□□□□□ -1.33
CRNKL1-202ENST00000377340 IGLV1-47P01700 117 aa6.71□□□□□ -1.33
CRNKL1-202ENST00000377340 KRTDAPP60985 99 aa6.71□□□□□ -1.33
CRNKL1-202ENST00000377340 AMMECR1LQ6DCA0 310 aa6.71□□□□□ -1.33
CRNKL1-202ENST00000377340 ZNF295-AS1Q8N0V1 137 aa6.71□□□□□ -1.33
CRNKL1-202ENST00000377340 TXNDC17Q9BRA2 123 aa6.71□□□□□ -1.33
CRNKL1-202ENST00000377340 GPR61Q9BZJ8 451 aa6.71□□□□□ -1.33
CRNKL1-202ENST00000377340 TRAV8-1A0A0A6YYK1 113 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 IGHV7-81A0A0B4J1V7 117 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 PGPEP1LA6NFU8 196 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 DNAJC9-AS1A6NH13 148 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 FAM74A3Q4VXF1 159 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 HAPLN4Q86UW8 402 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 CIARTQ8N365 385 aaPredicted RBP6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 AP1S3Q96PC3 154 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 DUSP14O95147 198 aaKnown RBP6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 CKS2P33552 79 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 ZNF841Q6ZN19 808 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 TRGV9Q99603 122 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 KLK15Q9H2R5 256 aa6.71□□□□□ -1.34
CRNKL1-202ENST00000377340 KIAA1644Q3SXP7 199 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 RPP25LQ8N5L8 163 aaKnown RBP6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 NUP210LQ5VU65 1888 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 TRAV12-3A0A0B4J271 114 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 SLC17A3O00476 420 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 HOXD3P31249 432 aaPredicted RBP6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 SLURP1P55000 103 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 TMEM183BQ1AE95 376 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 PRSS57Q6UWY2 283 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 Q6ZSR3 168 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms