RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 TEX46H3BTG2 121 aa17.42■□□□□ 0.38
HLA-C-202ENST00000376237 CHEK1O14757 476 aa17.42■□□□□ 0.38
HLA-C-202ENST00000376237 STAG3L2P0CL84 134 aa17.42■□□□□ 0.38
HLA-C-202ENST00000376237 STAG3L3P0CL85 134 aa17.42■□□□□ 0.38
HLA-C-202ENST00000376237 RPL7P18124 248 aaKnown RBP17.42■□□□□ 0.38
HLA-C-202ENST00000376237 C16orf54Q6UWD8 224 aa17.42■□□□□ 0.38
HLA-C-202ENST00000376237 PQLC2Q6ZP29 291 aa17.42■□□□□ 0.38
HLA-C-202ENST00000376237 BPIFA4PQ86YQ2 179 aa17.42■□□□□ 0.38
HLA-C-202ENST00000376237 IGHV3-49A0A0A0MS15 119 aa17.41■□□□□ 0.38
HLA-C-202ENST00000376237 CSN3P07498 182 aa17.41■□□□□ 0.38
HLA-C-202ENST00000376237 KRTAP21-3Q3LHN1 58 aa17.41■□□□□ 0.38
HLA-C-202ENST00000376237 LEMD1Q68G75 181 aa17.41■□□□□ 0.38
HLA-C-202ENST00000376237 IL34Q6ZMJ4 242 aa17.41■□□□□ 0.38
HLA-C-202ENST00000376237 FAM167A-AS1Q96KT0 104 aa17.41■□□□□ 0.38
HLA-C-202ENST00000376237 SLC25A2Q9BXI2 301 aa17.41■□□□□ 0.38
HLA-C-202ENST00000376237 IGHV3OR16-13A0A075B7E8 117 aa17.4■□□□□ 0.38
HLA-C-202ENST00000376237 IGHV3-74A0A0B4J1X5 117 aa17.4■□□□□ 0.38
HLA-C-202ENST00000376237 TRAV5A0A0B4J249 113 aa17.4■□□□□ 0.38
HLA-C-202ENST00000376237 CD5P06127 495 aa17.4■□□□□ 0.38
HLA-C-202ENST00000376237 SFT2D1Q8WV19 159 aa17.4■□□□□ 0.38
HLA-C-202ENST00000376237 TMEM14CQ9P0S9 112 aa17.4■□□□□ 0.38
HLA-C-202ENST00000376237 MAP1LC3B2A6NCE7 125 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 RGS13O14921 159 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 CXorf1O96002 111 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 HBE1P02100 147 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 RAB14P61106 215 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 LCN15Q6UWW0 184 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 SSX7Q7RTT5 188 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 MAP1LC3BQ9GZQ8 125 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 OR51M1Q9H341 326 aa17.39■□□□□ 0.37
HLA-C-202ENST00000376237 TRAV1-1A0A0B4J248 108 aa17.38■□□□□ 0.37
HLA-C-202ENST00000376237 IGHV3-66A0A0C4DH42 116 aa17.38■□□□□ 0.37
HLA-C-202ENST00000376237 HMGB3O15347 200 aaKnown RBP17.38■□□□□ 0.37
HLA-C-202ENST00000376237 OR7C2O60412 319 aa17.38■□□□□ 0.37
HLA-C-202ENST00000376237 GLMPQ8WWB7 406 aa17.38■□□□□ 0.37
HLA-C-202ENST00000376237 HELTA6NFD8 242 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 GALR1P47211 349 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 ADAMTSL5Q6ZMM2 481 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 WFDC9Q8NEX5 89 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 PAXXQ9BUH6 204 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 ARL14EPLP0DKL9 152 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 EDN2P20800 178 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 SIGLEC15Q6ZMC9 328 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 DYNLRB2Q8TF09 96 aa17.37■□□□□ 0.37
HLA-C-202ENST00000376237 MRPS12O15235 138 aaKnown RBP17.36■□□□□ 0.37
HLA-C-202ENST00000376237 EIF3GO75821 320 aaKnown RBP eCLIP17.36■□□□□ 0.37
HLA-C-202ENST00000376237 GP9P14770 177 aa17.36■□□□□ 0.37
HLA-C-202ENST00000376237 MCRIP2Q9BUT9 160 aaKnown RBP17.36■□□□□ 0.37
HLA-C-202ENST00000376237 STAB1Q9NY15 2570 aa17.35■□□□□ 0.37
HLA-C-202ENST00000376237 NMBP08949 121 aa17.35■□□□□ 0.37
HLA-C-202ENST00000376237 CD33P20138 364 aa17.35■□□□□ 0.37
HLA-C-202ENST00000376237 MEOX2P50222 304 aa17.35■□□□□ 0.37
HLA-C-202ENST00000376237 ZNF503Q96F45 646 aa17.35■□□□□ 0.37
HLA-C-202ENST00000376237 TMEM167BQ9NRX6 74 aa17.35■□□□□ 0.37
HLA-C-202ENST00000376237 MLXQ9UH92 298 aa17.35■□□□□ 0.37
HLA-C-202ENST00000376237 SAP30O75446 220 aa17.34■□□□□ 0.37
HLA-C-202ENST00000376237 HIST1H1EP10412 219 aaKnown RBP17.34■□□□□ 0.37
HLA-C-202ENST00000376237 INSL3P51460 131 aa17.34■□□□□ 0.37
HLA-C-202ENST00000376237 TCF24Q7RTU0 167 aa17.34■□□□□ 0.37
HLA-C-202ENST00000376237 LYPD6BQ8NI32 183 aa17.34■□□□□ 0.37
HLA-C-202ENST00000376237 HRH4Q9H3N8 390 aa17.34■□□□□ 0.37
HLA-C-202ENST00000376237 PYYP10082 97 aa17.33■□□□□ 0.37
HLA-C-202ENST00000376237 ATF4P18848 351 aaPredicted RBP17.33■□□□□ 0.37
HLA-C-202ENST00000376237 GCHFRP30047 84 aa17.33■□□□□ 0.37
HLA-C-202ENST00000376237 PSMB3P49720 205 aa17.33■□□□□ 0.37
HLA-C-202ENST00000376237 FGF8P55075 233 aaPredicted RBP17.33■□□□□ 0.37
HLA-C-202ENST00000376237 UBE2L3P68036 154 aaKnown RBP17.33■□□□□ 0.37
HLA-C-202ENST00000376237 GUK1Q16774 197 aa17.33■□□□□ 0.37
HLA-C-202ENST00000376237 DEFB114Q30KQ6 69 aa17.33■□□□□ 0.37
HLA-C-202ENST00000376237 CLLU1Q5K131 121 aa17.33■□□□□ 0.37
HLA-C-202ENST00000376237 FAM90A2PQ658T7 463 aa17.33■□□□□ 0.37
HLA-C-202ENST00000376237 WNK1Q9H4A3 2382 aa17.33■□□□□ 0.36
HLA-C-202ENST00000376237 ZNF785A8K8V0 405 aa17.32■□□□□ 0.36
HLA-C-202ENST00000376237 OR10J4P0C629 311 aa17.32■□□□□ 0.36
HLA-C-202ENST00000376237 NBEAP1P0C6P0 100 aa17.32■□□□□ 0.36
HLA-C-202ENST00000376237 IGLC2P0DOY2 106 aa17.32■□□□□ 0.36
HLA-C-202ENST00000376237 SUN5Q8TC36 379 aa17.32■□□□□ 0.36
HLA-C-202ENST00000376237 FXYD5Q96DB9 178 aa17.32■□□□□ 0.36
HLA-C-202ENST00000376237 SMAD5-AS1Q9Y6J3 95 aa17.32■□□□□ 0.36
HLA-C-202ENST00000376237 A0A087X0K7 114 aa17.31■□□□□ 0.36
HLA-C-202ENST00000376237 PPT1P50897 306 aa17.31■□□□□ 0.36
HLA-C-202ENST00000376237 RPL11P62913 178 aaKnown RBP17.31■□□□□ 0.36
HLA-C-202ENST00000376237 C9orf66Q5T8R8 295 aa17.31■□□□□ 0.36
HLA-C-202ENST00000376237 IQCF2Q8IXL9 164 aa17.31■□□□□ 0.36
HLA-C-202ENST00000376237 TRAV25A0A0B4J276 109 aa17.31■□□□□ 0.36
HLA-C-202ENST00000376237 OR2K2Q8NGT1 345 aa17.31■□□□□ 0.36
HLA-C-202ENST00000376237 H3BQ15 152 aa17.3■□□□□ 0.36
HLA-C-202ENST00000376237 PMS2P11Q13670 270 aa17.3■□□□□ 0.36
HLA-C-202ENST00000376237 PDE6HQ13956 83 aa17.3■□□□□ 0.36
HLA-C-202ENST00000376237 RBPMS2Q6ZRY4 209 aaKnown RBP17.3■□□□□ 0.36
HLA-C-202ENST00000376237 SPATA3Q8NHX4 192 aa17.3■□□□□ 0.36
HLA-C-202ENST00000376237 NRN1Q9NPD7 142 aa17.3■□□□□ 0.36
HLA-C-202ENST00000376237 ZNF586Q9NXT0 402 aa17.3■□□□□ 0.36
HLA-C-202ENST00000376237 A0A1B0GV50 99 aa17.29■□□□□ 0.36
HLA-C-202ENST00000376237 IGLV1-51P01701 117 aa17.29■□□□□ 0.36
HLA-C-202ENST00000376237 PAFAH1B2P68402 229 aa17.29■□□□□ 0.36
HLA-C-202ENST00000376237 SAMD13Q5VXD3 122 aa17.29■□□□□ 0.36
HLA-C-202ENST00000376237 PCNPQ8WW12 178 aaKnown RBP17.29■□□□□ 0.36
HLA-C-202ENST00000376237 TMPRSS5Q9H3S3 457 aa17.29■□□□□ 0.36
HLA-C-202ENST00000376237 TRBV19A0A075B6N1 114 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms