RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 LOXL3P58215 753 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 RIGQ13278 110 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 PIFOQ8TCI5 191 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 CACNG8Q8WXS5 425 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 ZNF479Q96JC4 524 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 TM2D2Q9BX73 214 aa10.36□□□□□ -0.75
PRPF4-201ENST00000374198 LOC389332A0A1B0GUA5 103 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 A0A1W2PQM1 296 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 PLAUP00749 431 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 POU2AF1Q16633 256 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 IFI27L1Q96BM0 104 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 OBP2BQ9NPH6 170 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 SS18L2Q9UHA2 77 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 PSG8Q9UQ74 426 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 NTN3O00634 580 aaPredicted RBP10.35□□□□□ -0.75
PRPF4-201ENST00000374198 LINC00305Q7Z4B0 112 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 CEND1Q8N111 149 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 RNF183Q96D59 192 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 CDIP1Q9H305 208 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 ERG28Q9UKR5 140 aa10.35□□□□□ -0.75
PRPF4-201ENST00000374198 TMEM8BA6NDV4 472 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 IQCF6A8MYZ5 107 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 UPK2O00526 184 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 TBC1D28Q2M2D7 210 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 AMTNQ6UX39 209 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 DKK2Q9UBU2 259 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 IGKV2D-26A0A0A0MRZ7 120 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 HBDP02042 147 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 TCRAP04437 139 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 FXYD7P58549 80 aa10.34□□□□□ -0.75
PRPF4-201ENST00000374198 CFHR2P36980 270 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 CIARTQ8N365 385 aaPredicted RBP10.33□□□□□ -0.76
PRPF4-201ENST00000374198 CD177Q8N6Q3 437 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 SYT8Q8NBV8 401 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 TTTY13Q9BZ97 58 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 B4GALT7Q9UBV7 327 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 IGF2RP11717 2491 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 A0A1B0GW15 77 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 PINLYPA6NC86 204 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 C16orf97H3BN30 126 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 KLRD1Q13241 179 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 PSMG4Q5JS54 123 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 UTF1Q5T230 341 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 AKAP13Q12802 2813 aa10.33□□□□□ -0.76
PRPF4-201ENST00000374198 MAP1BP46821 2468 aaKnown RBP10.32□□□□□ -0.76
PRPF4-201ENST00000374198 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 IGHV5-10-1A0A0J9YXX1 117 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 K7EMI3 77 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 NDUFS7O75251 213 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 APOMO95445 188 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 MT-ATP8P03928 68 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
PRPF4-201ENST00000374198 FOXI1Q12951 378 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 INO80CQ6PI98 192 aaPredicted RBP10.32□□□□□ -0.76
PRPF4-201ENST00000374198 LEAP2Q969E1 77 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.32□□□□□ -0.76
PRPF4-201ENST00000374198 A0A1B0GWB2 263 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 hADV38S2A0JD32 116 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 PAX8Q06710 450 aa10.32□□□□□ -0.76
PRPF4-201ENST00000374198 SRSF12Q8WXF0 261 aaKnown RBP10.32□□□□□ -0.76
PRPF4-201ENST00000374198 D6R8Y8 96 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 ABHD17BQ5VST6 288 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 Q86TA4 180 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 RBMXL3Q8N7X1 1067 aaKnown RBP10.31□□□□□ -0.76
PRPF4-201ENST00000374198 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 IGKV1D-37A0A075B6S9 117 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 PRDX2P32119 198 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 SRSF1Q07955 248 aaKnown RBP eCLIP10.31□□□□□ -0.76
PRPF4-201ENST00000374198 TRAV8-1A0A0A6YYK1 113 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 WI2-2373I1.2A0A1W2PRP0 233 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 C12orf74Q32Q52 190 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.31□□□□□ -0.76
PRPF4-201ENST00000374198 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 CXXC4Q9H2H0 198 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 Q9H3A6 140 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 HHLA3Q9XRX5 114 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 RAXQ9Y2V3 346 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 U3KQK5 164 aa10.31□□□□□ -0.76
PRPF4-201ENST00000374198 NPIPB5A8MRT5 1133 aa10.3□□□□□ -0.76
PRPF4-201ENST00000374198 VSTM5A8MXK1 200 aa10.3□□□□□ -0.76
PRPF4-201ENST00000374198 MPV17P39210 176 aa10.3□□□□□ -0.76
PRPF4-201ENST00000374198 ZNF493Q6ZR52 646 aa10.3□□□□□ -0.76
PRPF4-201ENST00000374198 Q6ZUT4 128 aa10.3□□□□□ -0.76
PRPF4-201ENST00000374198 C1QTNF4Q9BXJ3 329 aa10.3□□□□□ -0.76
PRPF4-201ENST00000374198 SRSF6Q13247 344 aaKnown RBP10.3□□□□□ -0.76
PRPF4-201ENST00000374198 SHISA2Q6UWI4 295 aa10.3□□□□□ -0.76
PRPF4-201ENST00000374198 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
PRPF4-201ENST00000374198 FLYWCH2Q96CP2 140 aaKnown RBP10.3□□□□□ -0.76
PRPF4-201ENST00000374198 ACACAQ13085 2346 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 SHISA9B4DS77 424 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 H3BTX0 84 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 ORM2P19652 201 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 CYB561P49447 251 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 XGP55808 180 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 GAGE5Q13069 117 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 GAGE6Q13070 117 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 C3AR1Q16581 482 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 ZNF562Q6V9R5 426 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 PRNTQ86SH4 94 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 WFDC3Q8IUB2 231 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms