RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 EIF4EBP2Q13542 120 aaPredicted RBP11.83□□□□□ -0.52
UBR2-201ENST00000372899 MRPL14Q6P1L8 145 aaKnown RBP11.83□□□□□ -0.52
UBR2-201ENST00000372899 NYNRINQ9P2P1 1898 aaKnown RBP11.83□□□□□ -0.52
UBR2-201ENST00000372899 FRMPD3Q5JV73 1810 aa11.83□□□□□ -0.52
UBR2-201ENST00000372899 FOXF2Q12947 444 aa11.83□□□□□ -0.52
UBR2-201ENST00000372899 SAA4P35542 130 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 EXOC3-AS1Q8N2X6 119 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 A0A087WWL8 130 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 BUB1B-PAK6H3BSN5 160 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 NPDC1Q9NQX5 325 aaPredicted RBP11.82□□□□□ -0.52
UBR2-201ENST00000372899 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
UBR2-201ENST00000372899 CTHRC1Q96CG8 243 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 IGKV2D-24A0A075B6R9 120 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 TFF1P04155 84 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
UBR2-201ENST00000372899 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 RHPN1-AS1Q9BWJ2 59 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 SCRT1Q9BWW7 348 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 LCTP09848 1927 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 GAGE2BQ13066 116 aa11.82□□□□□ -0.52
UBR2-201ENST00000372899 PRTN3P24158 256 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 C5orf64Q2M2E5 130 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 IGF2BP2-AS1Q96M15 143 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 ERVH48-1M5A8F1 160 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 EFNA2O43921 213 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 PRSS23O95084 383 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 GAGE1Q13065 139 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 GAGE4Q13068 117 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 GAGE5Q13069 117 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 HELZP42694 1942 aaKnown RBP11.81□□□□□ -0.52
UBR2-201ENST00000372899 SOCS3O14543 225 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 MST1LQ2TV78 715 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 GSN-AS1Q9NRJ2 163 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 COL5A3P25940 1745 aaPredicted RBP11.81□□□□□ -0.52
UBR2-201ENST00000372899 ZNF479Q96JC4 524 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 FBLIM1Q8WUP2 373 aa11.81□□□□□ -0.52
UBR2-201ENST00000372899 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.525e-8■■■■■ 47.8
UBR2-201ENST00000372899 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 LY6G5BQ8NDX9 201 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 D6R8Y8 96 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 SLC25A48Q6ZT89 311 aaKnown RBP11.8□□□□□ -0.52
UBR2-201ENST00000372899 RNF5Q99942 180 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 MGAMO43451 1857 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 IGHV3-16A0A0C4DH30 117 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 A0A1W2PRE2 83 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 CD55P08174 381 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 PFN2P35080 140 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 IGLV3-21P80748 117 aaPredicted RBP11.8□□□□□ -0.52
UBR2-201ENST00000372899 EFNB3Q15768 340 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 C14orf178Q8N769 122 aaPredicted RBP11.8□□□□□ -0.52
UBR2-201ENST00000372899 TMEM158Q8WZ71 300 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 GNB1LQ9BYB4 327 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 TRBV5-3A0A0A0MS03 114 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 OSTCQ9NRP0 149 aa11.8□□□□□ -0.52
UBR2-201ENST00000372899 ANGP03950 147 aaKnown RBP11.8□□□□□ -0.52
UBR2-201ENST00000372899 NABP1Q96AH0 204 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 COL11A2P13942 1736 aaPredicted RBP11.79□□□□□ -0.52
UBR2-201ENST00000372899 RPUSD1Q9UJJ7 312 aaKnown RBP11.79□□□□□ -0.52
UBR2-201ENST00000372899 GAGE12BA1L429 117 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 SH2D1AO60880 128 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 GAGE7O76087 117 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 NCR2O95944 276 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 TSKUQ8WUA8 353 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 TRGV9Q99603 122 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 TMEM243Q9BU79 118 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 SCRT2Q9NQ03 307 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 EML6Q6ZMW3 1958 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 NEUROG3Q9Y4Z2 214 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 TRBV6-7A0A0A0MS04 114 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 IGKV1OR2-108A0A075B7D4 117 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 RPL18AQ02543 176 aaKnown RBP11.79□□□□□ -0.52
UBR2-201ENST00000372899 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 WBP1Q96G27 269 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 DMRT1Q9Y5R6 373 aa11.79□□□□□ -0.52
UBR2-201ENST00000372899 CD59P13987 128 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 HSD52Q0P140 79 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 C1orf122Q6ZSJ8 110 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 DEFB105AQ8NG35 78 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 A0A1B0GWJ7 208 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 PLSCR4Q9NRQ2 329 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 LIME1Q9H400 295 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 ZNF98A6NK75 572 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 KLF17Q5JT82 389 aaPredicted RBP11.78□□□□□ -0.52
UBR2-201ENST00000372899 PRSS29PA6NIE9 313 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 SERF1AO75920 110 aa11.78□□□□□ -0.52
UBR2-201ENST00000372899 RHODO00212 210 aa11.77□□□□□ -0.52
UBR2-201ENST00000372899 GZMMP51124 257 aa11.77□□□□□ -0.52
UBR2-201ENST00000372899 H2BFSP57053 126 aa11.77□□□□□ -0.52
UBR2-201ENST00000372899 Q9HAA7 133 aa11.77□□□□□ -0.52
UBR2-201ENST00000372899 DEPPQ9NTK1 212 aa11.77□□□□□ -0.52
UBR2-201ENST00000372899 GAGE6Q13070 117 aa11.77□□□□□ -0.52
UBR2-201ENST00000372899 A6NNC1 897 aa11.77□□□□□ -0.53
UBR2-201ENST00000372899 C4orf51C9J302 202 aa11.77□□□□□ -0.53
UBR2-201ENST00000372899 DKK1O94907 266 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms