RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 FAM213BQ8TBF2 198 aa12.02□□□□□ -0.49
TMEM53-204ENST00000372243 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
TMEM53-204ENST00000372243 SAT2Q96F10 170 aaPredicted RBP12.02□□□□□ -0.49
TMEM53-204ENST00000372243 SLC25A22Q9H936 323 aa12.02□□□□□ -0.49
TMEM53-204ENST00000372243 CD5P06127 495 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 EDN2P20800 178 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 KHDC3LQ587J8 217 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 ADAMTSL5Q6ZMM2 481 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 GLMPQ8WWB7 406 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 FAM167A-AS1Q96KT0 104 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 SLC25A2Q9BXI2 301 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 TMEM14CQ9P0S9 112 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 IGHV3OR16-13A0A075B7E8 117 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 IGHV3-74A0A0B4J1X5 117 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 TRAV5A0A0B4J249 113 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 ZNF705EA8MWA4 302 aaPredicted RBP12.01□□□□□ -0.49
TMEM53-204ENST00000372243 H2AFB1P0C5Y9 115 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 RPL7P18124 248 aaKnown RBP12.01□□□□□ -0.49
TMEM53-204ENST00000372243 BLOC1S1P78537 153 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 LEMD1Q68G75 181 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 PQLC2Q6ZP29 291 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 SSX7Q7RTT5 188 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 BPIFA4PQ86YQ2 179 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 OR8I2Q8N0Y5 310 aa12.01□□□□□ -0.49
TMEM53-204ENST00000372243 WNK1Q9H4A3 2382 aa12□□□□□ -0.49
TMEM53-204ENST00000372243 IGHV3-66A0A0C4DH42 116 aa12□□□□□ -0.49
TMEM53-204ENST00000372243 TRAV1-1A0A0B4J248 108 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 MAP1LC3B2A6NCE7 125 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 HELTA6NFD8 242 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
TMEM53-204ENST00000372243 CXorf1O96002 111 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 GP9P14770 177 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 SIGLEC15Q6ZMC9 328 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 SPATA3Q8NHX4 192 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 MCRIP2Q9BUT9 160 aaKnown RBP11.99□□□□□ -0.49
TMEM53-204ENST00000372243 MAP1LC3BQ9GZQ8 125 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 OR51M1Q9H341 326 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 MLXQ9UH92 298 aa11.99□□□□□ -0.49
TMEM53-204ENST00000372243 RGS13O14921 159 aa11.98□□□□□ -0.49
TMEM53-204ENST00000372243 HMGB3O15347 200 aaKnown RBP11.98□□□□□ -0.49
TMEM53-204ENST00000372243 OR7C2O60412 319 aa11.98□□□□□ -0.49
TMEM53-204ENST00000372243 GALR1P47211 349 aa11.98□□□□□ -0.49
TMEM53-204ENST00000372243 INSL3P51460 131 aa11.98□□□□□ -0.49
TMEM53-204ENST00000372243 FAM90A2PQ658T7 463 aa11.98□□□□□ -0.49
TMEM53-204ENST00000372243 LCN15Q6UWW0 184 aa11.98□□□□□ -0.49
TMEM53-204ENST00000372243 SFT2D1Q8WV19 159 aa11.98□□□□□ -0.49
TMEM53-204ENST00000372243 ZNF503Q96F45 646 aa11.98□□□□□ -0.49
TMEM53-204ENST00000372243 TEX46H3BTG2 121 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 SAP30O75446 220 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 HBE1P02100 147 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 ARL14EPLP0DKL9 152 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 CD33P20138 364 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 DEFB114Q30KQ6 69 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 LYPD6BQ8NI32 183 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 DYNLRB2Q8TF09 96 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 PAXXQ9BUH6 204 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 VWFP04275 2813 aa11.97□□□□□ -0.49
TMEM53-204ENST00000372243 A0A087X0K7 114 aa11.96□□□□□ -0.49
TMEM53-204ENST00000372243 EIF3GO75821 320 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM53-204ENST00000372243 IGLC2P0DOY2 106 aa11.96□□□□□ -0.49
TMEM53-204ENST00000372243 HIST1H1EP10412 219 aaKnown RBP11.96□□□□□ -0.49
TMEM53-204ENST00000372243 MEOX2P50222 304 aa11.96□□□□□ -0.49
TMEM53-204ENST00000372243 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
TMEM53-204ENST00000372243 OR2K2Q8NGT1 345 aa11.96□□□□□ -0.49
TMEM53-204ENST00000372243 SUN5Q8TC36 379 aa11.96□□□□□ -0.49
TMEM53-204ENST00000372243 HRH4Q9H3N8 390 aa11.96□□□□□ -0.49
TMEM53-204ENST00000372243 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.49
TMEM53-204ENST00000372243 TRAV25A0A0B4J276 109 aa11.96□□□□□ -0.5
TMEM53-204ENST00000372243 IGLV1-51P01701 117 aa11.96□□□□□ -0.5
TMEM53-204ENST00000372243 NMBP08949 121 aa11.96□□□□□ -0.5
TMEM53-204ENST00000372243 PYYP10082 97 aa11.96□□□□□ -0.5
TMEM53-204ENST00000372243 GUK1Q16774 197 aa11.96□□□□□ -0.5
TMEM53-204ENST00000372243 C9orf66Q5T8R8 295 aa11.96□□□□□ -0.5
TMEM53-204ENST00000372243 FXYD5Q96DB9 178 aa11.96□□□□□ -0.5
TMEM53-204ENST00000372243 TMEM167BQ9NRX6 74 aa11.96□□□□□ -0.5
TMEM53-204ENST00000372243 TRRAPQ9Y4A5 3859 aa11.95□□□□□ -0.5
TMEM53-204ENST00000372243 ATF4P18848 351 aaPredicted RBP11.95□□□□□ -0.5
TMEM53-204ENST00000372243 GCHFRP30047 84 aa11.95□□□□□ -0.5
TMEM53-204ENST00000372243 PSMB3P49720 205 aa11.95□□□□□ -0.5
TMEM53-204ENST00000372243 FGF8P55075 233 aaPredicted RBP11.95□□□□□ -0.5
TMEM53-204ENST00000372243 RAB14P61106 215 aa11.95□□□□□ -0.5
TMEM53-204ENST00000372243 UBE2L3P68036 154 aaKnown RBP11.95□□□□□ -0.5
TMEM53-204ENST00000372243 TSPAN4O14817 238 aa11.94□□□□□ -0.5
TMEM53-204ENST00000372243 OR10J4P0C629 311 aa11.94□□□□□ -0.5
TMEM53-204ENST00000372243 NBEAP1P0C6P0 100 aa11.94□□□□□ -0.5
TMEM53-204ENST00000372243 PDE6HQ13956 83 aa11.94□□□□□ -0.5
TMEM53-204ENST00000372243 PRR31Q5SQ13 230 aa11.94□□□□□ -0.5
TMEM53-204ENST00000372243 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
TMEM53-204ENST00000372243 C17orf77Q96MU5 243 aa11.94□□□□□ -0.5
TMEM53-204ENST00000372243 NRN1Q9NPD7 142 aa11.94□□□□□ -0.5
TMEM53-204ENST00000372243 ZNF586Q9NXT0 402 aa11.94□□□□□ -0.5
TMEM53-204ENST00000372243 ZNF785A8K8V0 405 aa11.93□□□□□ -0.5
TMEM53-204ENST00000372243 H3BQ15 152 aa11.93□□□□□ -0.5
TMEM53-204ENST00000372243 WIPF1O43516 503 aa11.93□□□□□ -0.5
TMEM53-204ENST00000372243 PPT1P50897 306 aa11.93□□□□□ -0.5
TMEM53-204ENST00000372243 RPL11P62913 178 aaKnown RBP11.93□□□□□ -0.5
TMEM53-204ENST00000372243 PMS2P11Q13670 270 aa11.93□□□□□ -0.5
TMEM53-204ENST00000372243 CD300EQ496F6 205 aaPredicted RBP11.93□□□□□ -0.5
TMEM53-204ENST00000372243 CLLU1Q5K131 121 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms