RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 VSIRQ9H7M9 311 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 IGHMP01871 453 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 LINC01551Q86U37 167 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 DTX1Q86Y01 620 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 LINC01565O15544 149 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 TRIP6Q15654 476 aaKnown RBP12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 FGF16O43320 207 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 PEMTQ9UBM1 199 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 SAA2-SAA4A0A096LPE2 208 aa12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 SAA2P0DJI9 122 aaPredicted RBP12.73□□□□□ -0.37
GTF3C4-201ENST00000372146 CARD19Q96LW7 228 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 MMP23AO75900 390 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 IL18BPO95998 194 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 AMN1Q8IY45 258 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 C15orf53Q8NAA6 179 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 C8orf46Q8TAG6 207 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 A0A087WX48 190 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 NEGR1Q7Z3B1 354 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 MRPL55Q7Z7F7 128 aaKnown RBP12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 BMPERQ8N8U9 685 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 GVINP1Q7Z2Y8 2422 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 A0A1B0GTI1 187 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 C1orf159Q96HA4 380 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 LOC102723996A0A087X1L8 192 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 VCYO14598 125 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 MYOD1P15172 320 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 ZNF876PQ49A33 203 aa12.72□□□□□ -0.37
GTF3C4-201ENST00000372146 ZFP36L2P47974 494 aaKnown RBP12.71□□□□□ -0.37
GTF3C4-201ENST00000372146 TMEM52Q8NDY8 209 aa12.71□□□□□ -0.37
GTF3C4-201ENST00000372146 CRLF1O75462 422 aa12.71□□□□□ -0.37
GTF3C4-201ENST00000372146 PVRIGQ6DKI7 326 aa12.71□□□□□ -0.37
GTF3C4-201ENST00000372146 AGMATQ9BSE5 352 aa12.71□□□□□ -0.37
GTF3C4-201ENST00000372146 IGHV3-11P01762 117 aa12.71□□□□□ -0.38
GTF3C4-201ENST00000372146 REG4Q9BYZ8 158 aa12.71□□□□□ -0.38
GTF3C4-201ENST00000372146 A0A1B0GW64 132 aa12.71□□□□□ -0.38
GTF3C4-201ENST00000372146 FOXG1P55316 489 aaPredicted RBP12.71□□□□□ -0.38
GTF3C4-201ENST00000372146 LY6G6FQ5SQ64 297 aa12.71□□□□□ -0.38
GTF3C4-201ENST00000372146 PILRAQ9UKJ1 303 aa12.71□□□□□ -0.38
GTF3C4-201ENST00000372146 MGAMO43451 1857 aa12.7□□□□□ -0.38
GTF3C4-201ENST00000372146 C12orf77C9JDV5 145 aa12.7□□□□□ -0.38
GTF3C4-201ENST00000372146 PEBP1P30086 187 aaKnown RBP12.7□□□□□ -0.38
GTF3C4-201ENST00000372146 ANAPC1Q9H1A4 1944 aa12.7□□□□□ -0.38
GTF3C4-201ENST00000372146 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
GTF3C4-201ENST00000372146 RCHY1Q96PM5 261 aa12.7□□□□□ -0.38
GTF3C4-201ENST00000372146 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
GTF3C4-201ENST00000372146 GLI3P10071 1580 aa12.7□□□□□ -0.38
GTF3C4-201ENST00000372146 SRXN1Q9BYN0 137 aa12.69□□□□□ -0.38
GTF3C4-201ENST00000372146 PRR33A8MZF0 331 aa12.69□□□□□ -0.38
GTF3C4-201ENST00000372146 RPL15P61313 204 aaKnown RBP12.69□□□□□ -0.38
GTF3C4-201ENST00000372146 SPTSSBQ8NFR3 76 aa12.69□□□□□ -0.38
GTF3C4-201ENST00000372146 PMS2P5A8MQ11 134 aa12.69□□□□□ -0.38
GTF3C4-201ENST00000372146 KLRD1Q13241 179 aa12.69□□□□□ -0.38
GTF3C4-201ENST00000372146 PSCAO43653 123 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 CELA2AP08217 269 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 LIMS2Q7Z4I7 341 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 SH2D1AO60880 128 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 CD160O95971 181 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 ATP5J2P56134 94 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 C14orf178Q8N769 122 aaPredicted RBP12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 TRAV12-2A0A075B6T6 113 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 CCL4P13236 92 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 C20orf144Q9BQM9 153 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 IGHV1-45A0A0A0MS14 117 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 A0A1B0GUS0 222 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 RSPO4Q2I0M5 234 aaPredicted RBP12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 IGLC2P0DOY2 106 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 IGLC3P0DOY3 106 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 THAP8Q8NA92 274 aa12.68□□□□□ -0.38
GTF3C4-201ENST00000372146 PLA2G2FQ9BZM2 168 aa12.67□□□□□ -0.38
GTF3C4-201ENST00000372146 SS18Q15532 418 aa12.67□□□□□ -0.38
GTF3C4-201ENST00000372146 RNF115Q9Y4L5 304 aa12.67□□□□□ -0.38
GTF3C4-201ENST00000372146 SPG11Q96JI7 2443 aa12.67□□□□□ -0.38
GTF3C4-201ENST00000372146 DUX4L9Q6RFH8 374 aaPredicted RBP12.67□□□□□ -0.38
GTF3C4-201ENST00000372146 CACNA1HO95180 2353 aa12.67□□□□□ -0.38
GTF3C4-201ENST00000372146 AHRRA9YTQ3 701 aa12.67□□□□□ -0.38
GTF3C4-201ENST00000372146 U3KQE9 123 aa12.67□□□□□ -0.38
GTF3C4-201ENST00000372146 C1QTNF5Q9BXJ0 243 aa12.66□□□□□ -0.38
GTF3C4-201ENST00000372146 NUP210Q8TEM1 1887 aaPredicted RBP12.66□□□□□ -0.38
GTF3C4-201ENST00000372146 TRGV1A0A0A0MS02 117 aa12.66□□□□□ -0.38
GTF3C4-201ENST00000372146 NBR2O15453 112 aa12.66□□□□□ -0.38
GTF3C4-201ENST00000372146 PRO1854Q9UHT4 67 aa12.66□□□□□ -0.38
GTF3C4-201ENST00000372146 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
GTF3C4-201ENST00000372146 UBE2DNLQ8IWF7 75 aa12.66□□□□□ -0.38
GTF3C4-201ENST00000372146 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
GTF3C4-201ENST00000372146 IGHV1OR15-9A0A0B4J2B8 117 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 UPK2O00526 184 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 HLA-DMBP28068 263 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 PRRC2AP48634 2157 aaKnown RBP12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 LY6G5BQ8NDX9 201 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 A0A0G2JK05 382 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 SHISA3A0PJX4 238 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 DPM3Q9P2X0 92 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 TRAV1-1A0A0B4J248 108 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 FAM236AA0A1B0GUQ0 79 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 FAM236BA0A1B0GV22 79 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 SRRM4A7MD48 611 aaKnown RBP12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 V9GYY9 64 aa12.65□□□□□ -0.38
GTF3C4-201ENST00000372146 A0A087WWL8 130 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms