RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ERG28Q9UKR5 140 aa13.98□□□□□ -0.17
PTP4A1-201ENST00000370651 TSC2P49815 1807 aa13.98□□□□□ -0.17
PTP4A1-201ENST00000370651 GTSF1LQ9H1H1 148 aa13.98□□□□□ -0.17
PTP4A1-201ENST00000370651 NPSP0C0P6 89 aa13.98□□□□□ -0.17
PTP4A1-201ENST00000370651 CYYR1Q96J86 154 aa13.98□□□□□ -0.17
PTP4A1-201ENST00000370651 TRAV8-4A0A0B4J246 113 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 IGHV1-3A0A0C4DH29 117 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 LYPD1Q8N2G4 141 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 YAE1D1Q9NRH1 226 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 TRAV12-3A0A0B4J271 114 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 Q86TA4 180 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 AMN1Q8IY45 258 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 ZNF524Q96C55 264 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 GFRA4Q9GZZ7 299 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 SLC25A15Q9Y619 301 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 WIPF3A6NGB9 483 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 OVOL1O14753 267 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 SMAD7O15105 426 aaKnown RBP13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 TRPM7Q96QT4 1865 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 CKS1BP61024 79 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 WDR81Q562E7 1941 aa13.97□□□□□ -0.17
PTP4A1-201ENST00000370651 IGKV1-39P01597 117 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 IGKV1D-39P04432 117 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 GAGE2BQ13066 116 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 GAGE2EQ4V326 116 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 Q8TAT8 98 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 GAGE2DQ9UEU5 116 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 IGKV1-16P04430 117 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 ITLN2Q8WWU7 325 aaPredicted RBP13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 LSM4Q9Y4Z0 139 aaKnown RBP13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 IGKV3D-20A0A0C4DH25 116 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 LINC01587Q99440 93 aa13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 KLF2Q9Y5W3 355 aaPredicted RBP13.96□□□□□ -0.17
PTP4A1-201ENST00000370651 TMEM158Q8WZ71 300 aa13.96□□□□□ -0.18
PTP4A1-201ENST00000370651 GAFA1Q96PS6 74 aa13.96□□□□□ -0.18
PTP4A1-201ENST00000370651 RNF5Q99942 180 aa13.96□□□□□ -0.18
PTP4A1-201ENST00000370651 CD28P10747 220 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 TMEM105Q8N8V8 129 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 WNT2P09544 360 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 PAX8Q06710 450 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 OCIAD2Q56VL3 154 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 SIGLEC15Q6ZMC9 328 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 CST9LQ9H4G1 147 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 ACACAQ13085 2346 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 LYPD6BQ8NI32 183 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 TMEM178BH3BS89 294 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 DLX4Q92988 240 aaPredicted RBP13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 CCL19Q99731 98 aa13.95□□□□□ -0.18
PTP4A1-201ENST00000370651 C15orf32Q32M92 178 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 SMKR1H3BMG3 65 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 ARMS2P0C7Q2 107 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 COX6B1P14854 86 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 ZFAND6Q6FIF0 208 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 STPG4Q8N801 248 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 CHAC1Q9BUX1 264 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 SIGLEC9Q9Y336 463 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 IGHV3-64A0A075B6Q5 118 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 TMEM238C9JI98 176 aa13.94□□□□□ -0.18
PTP4A1-201ENST00000370651 CACNA1HO95180 2353 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 ITGB1BP1O14713 200 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 TDGF1P13385 188 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 DOCK7Q96N67 2140 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 ZNF114Q8NC26 417 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 C7orf69Q9H7B7 122 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 V9GYV3 84 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 RBMY1BA6NDE4 496 aaKnown RBP13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 RBMY1EA6NEQ0 496 aaKnown RBP13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 DUSP14O95147 198 aaKnown RBP13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 RBMY1DP0C7P1 496 aaKnown RBP13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 RBMY1A1P0DJD3 496 aaKnown RBP13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 RBMY1CP0DJD4 496 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 ZNF492Q9P255 531 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 CADP27708 2225 aa13.93□□□□□ -0.18
PTP4A1-201ENST00000370651 FAM231BA6NCW3 169 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 LMO1P25800 156 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 TMEM14BQ9NUH8 114 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 CREBBPQ92793 2442 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 MYO7BQ6PIF6 2116 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 PRTN3P24158 256 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 HAPLN4Q86UW8 402 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 MDS2Q8NDY4 140 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 DOCK8Q8NF50 2099 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 HAX1O00165 279 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 CT83Q5H943 113 aa13.92□□□□□ -0.18
PTP4A1-201ENST00000370651 VDAC2P45880 294 aaPredicted RBP13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 GAGE1Q13065 139 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 ADAMTSL5Q6ZMM2 481 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 RIF1Q5UIP0 2472 aaKnown RBP13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 M0R2P5 195 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 NPFFR1Q9GZQ6 430 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 DOCK9Q9BZ29 2069 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 ATXN8Q156A1 80 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 FAM168AQ92567 244 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 PGPEP1Q9NXJ5 209 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 TMEM8BA6NDV4 472 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 CSRP1P21291 193 aaKnown RBP13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 SLAQ13239 276 aa13.91□□□□□ -0.18
PTP4A1-201ENST00000370651 DPH3P1Q9H4G8 78 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms