RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SIGLEC9Q9Y336 463 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 Q0VFX4 171 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 RSPO4Q2I0M5 234 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 TPTE2P1Q5T6R2 138 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 IGFL3Q6UXB1 125 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 BUB1B-PAK6H3BSN5 160 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 LDLRAD2Q5SZI1 272 aa9.86□□□□□ -0.83
CDC42BPA-203ENST00000366766 C10orf126Q8N4M7 172 aa9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 ZNF492Q9P255 531 aa9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 PSG3Q16557 428 aa9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 MORN3Q6PF18 240 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 TMEM75Q8N9X5 138 aa9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 OVOL2Q9BRP0 275 aa9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 SPATA31B1PQ5VZV4 182 aa9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 DTX2Q86UW9 622 aa9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 ZNF672Q499Z4 452 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 SSBP4Q9BWG4 385 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 C1orf147Q96MC9 270 aaPredicted RBP9.85□□□□□ -0.83
CDC42BPA-203ENST00000366766 LINC00473A8K010 186 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 ATG2AQ2TAZ0 1938 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 CCDC168Q8NDH2 2452 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 IGKV1D-17A0A075B6S4 117 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 Q8NFD4 153 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 NUP35Q8NFH5 326 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 ZNF418Q8TF45 676 aaPredicted RBP9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 GAFA1Q96PS6 74 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 PRDM6Q9NQX0 595 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 FBLN7Q53RD9 439 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 GCSAMLQ5JQS6 135 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 ZCCHC24Q8N2G6 241 aaKnown RBP9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 ST6GALNAC3Q8NDV1 305 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 PMS2P5A8MQ11 134 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 OR10W1Q8NGF6 305 aa9.84□□□□□ -0.83
CDC42BPA-203ENST00000366766 IGHV3-35A0A0C4DH35 117 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 FAM90A2PQ658T7 463 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 LINC00311Q8N616 119 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 VSIRQ9H7M9 311 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 HIVEP2P31629 2446 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 NDUFS8O00217 210 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 CA1P00915 261 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 RNASE2P10153 161 aaKnown RBP9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 FAM231DQ6ZW35 169 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 MMP23AO75900 390 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 LINC01587Q99440 93 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 SRSF2Q01130 221 aaKnown RBP9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 OR2K2Q8NGT1 345 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 PLEKHB2Q96CS7 222 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 YPEL3P61236 119 aaPredicted RBP9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 IGHV3OR16-12A0A075B7B8 117 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 C8orf31Q8N9H6 132 aa9.83□□□□□ -0.84
CDC42BPA-203ENST00000366766 TSPAN13O95857 204 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 IGLV3-1P01715 115 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 MLNRO43193 412 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 DPH3P1Q9H4G8 78 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 C20orf144Q9BQM9 153 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 NDUFA3O95167 84 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 NTF4P34130 210 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 IGHV3OR16-13A0A075B7E8 117 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 IGHV3-74A0A0B4J1X5 117 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 SYS1-DBNDD2H3BUS1 97 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 B4DSR2 109 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 VCYO14598 125 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 HOXA3O43365 443 aaPredicted RBP9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 DERL1Q9BUN8 251 aa9.82□□□□□ -0.84
CDC42BPA-203ENST00000366766 PRTN3P24158 256 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 TMEM86BQ8N661 226 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 PIEZO2Q9H5I5 2752 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 LOC102724200A0A096LPH7 203 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 SLC25A20O43772 301 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 KLF17Q5JT82 389 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 TMEM14CQ9P0S9 112 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 GZMBP10144 247 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 ZNF474Q6S9Z5 364 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 C1QTNF4Q9BXJ3 329 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 TGFAP01135 160 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 ITLN2Q8WWU7 325 aaPredicted RBP9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 DMRTA2Q96SC8 542 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 LURAP1LQ8IV03 231 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 NDUFA4L2Q9NRX3 87 aa9.81□□□□□ -0.84
CDC42BPA-203ENST00000366766 ZFYVE26Q68DK2 2539 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 BOD1L2Q8IYS8 172 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 TRGV2A0A075B6R0 118 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 IGHV3-49A0A0A0MS15 119 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 PLAURQ03405 335 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 ZNF562Q6V9R5 426 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 SPANXDQ9BXN6 97 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 PSMB11A5LHX3 300 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 D6R8Y8 96 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 Q86TA4 180 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 H3BUT2 72 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 STHQ8IWL8 128 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 SAMD5Q5TGI4 173 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 ZNF833PQ6ZTB9 187 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 ZNF329Q86UD4 541 aa9.8□□□□□ -0.84
CDC42BPA-203ENST00000366766 EMP1P54849 157 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms