RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 C2orf66Q6UXQ4 117 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 ZNF561-AS1K7EIQ3 104 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 IGHG4P01861 327 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 SHANK2-AS3Q9BTD1 123 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 SNRNP200O75643 2136 aaKnown RBP13.67□□□□□ -0.22
NID1-202ENST00000366595 GAGE12HA6NDE8 117 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 ETDBQ3ZM63 59 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 TP53TG1Q9Y2A0 90 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 H0YJW9 148 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 NTF4P34130 210 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 RBM3P98179 157 aaKnown RBP13.66□□□□□ -0.22
NID1-202ENST00000366595 LGALS9BQ3B8N2 356 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 LGALS9CQ6DKI2 356 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 ANKRD29Q8N6D5 301 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 HGFACQ04756 655 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 C18orf32Q8TCD1 76 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 PRO1854Q9UHT4 67 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 E9PLN8 166 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 IGLC2P0DOY2 106 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 IGLC3P0DOY3 106 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 SEC16AO15027 2179 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 ARMS2P0C7Q2 107 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 FGF6P10767 208 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 SLC25A16P16260 332 aa13.66□□□□□ -0.22
NID1-202ENST00000366595 I3L3M4 83 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 NDUFC2O95298 119 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 COX8AP10176 69 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 FAM104BQ5XKR9 115 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 VMO1Q7Z5L0 202 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 SMKR1H3BMG3 65 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 IGHV3-53P01767 116 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 CKAP5Q14008 2032 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 KIF13BQ9NQT8 1826 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 CRLF1O75462 422 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 TMEM200BQ69YZ2 307 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 ZNF318Q5VUA4 2279 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 TAF1P21675 1872 aa13.65□□□□□ -0.22
NID1-202ENST00000366595 NSUN5P1Q3KNT7 163 aa13.65□□□□□ -0.23
NID1-202ENST00000366595 UNC13CQ8NB66 2214 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 SIVA1O15304 175 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 C15orf62A8K5M9 175 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 LTBRP36941 435 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 NDUFB8O95169 186 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 IGLV3-19P01714 112 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 EFNA4P52798 201 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 A0A087WWL8 130 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 A0A1W2PPM0 123 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 CFPP27918 469 aa13.64□□□□□ -0.23
NID1-202ENST00000366595 DAZ1Q9NQZ3 744 aaKnown RBP13.64□□□□□ -0.23
NID1-202ENST00000366595 RHPN1-AS1Q9BWJ2 59 aa13.63□□□□□ -0.23
NID1-202ENST00000366595 SIGLEC9Q9Y336 463 aa13.63□□□□□ -0.23
NID1-202ENST00000366595 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
NID1-202ENST00000366595 ACYP1P07311 99 aa13.63□□□□□ -0.23
NID1-202ENST00000366595 RNASE2P10153 161 aaKnown RBP13.63□□□□□ -0.23
NID1-202ENST00000366595 SCN8AQ9UQD0 1980 aa13.62□□□□□ -0.23
NID1-202ENST00000366595 GLI3P10071 1580 aa13.62□□□□□ -0.23
NID1-202ENST00000366595 CARD19Q96LW7 228 aa13.62□□□□□ -0.23
NID1-202ENST00000366595 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
NID1-202ENST00000366595 MORN5Q5VZ52 161 aa13.62□□□□□ -0.23
NID1-202ENST00000366595 PFN1P07737 140 aaKnown RBP13.62□□□□□ -0.23
NID1-202ENST00000366595 TMEM178BH3BS89 294 aa13.61□□□□□ -0.23
NID1-202ENST00000366595 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
NID1-202ENST00000366595 SRSF2Q01130 221 aaKnown RBP13.61□□□□□ -0.23
NID1-202ENST00000366595 NDUFA12Q9UI09 145 aa13.61□□□□□ -0.23
NID1-202ENST00000366595 SYNJ2BPP57105 145 aa13.61□□□□□ -0.23
NID1-202ENST00000366595 FAM231DQ6ZW35 169 aa13.61□□□□□ -0.23
NID1-202ENST00000366595 CDK5RAP2Q96SN8 1893 aa13.61□□□□□ -0.23
NID1-202ENST00000366595 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 KLF5Q13887 457 aaPredicted RBP13.6□□□□□ -0.23
NID1-202ENST00000366595 C20orf204Q6ZNR8 217 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 LINC00527Q9UJ94 153 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 TRAV3A0A0B4J244 114 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 B4DSR2 109 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 GAS1P54826 345 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 GAGE5Q13069 117 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 GAGE6Q13070 117 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 CEND1Q8N111 149 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 SCRT2Q9NQ03 307 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 ZNF638Q14966 1978 aaKnown RBP13.6□□□□□ -0.23
NID1-202ENST00000366595 TRAV25A0A0B4J276 109 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 BUB1B-PAK6H3BSN5 160 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 TFF1P04155 84 aa13.6□□□□□ -0.23
NID1-202ENST00000366595 PSPNO60542 156 aa13.59□□□□□ -0.23
NID1-202ENST00000366595 NDPQ00604 133 aa13.59□□□□□ -0.23
NID1-202ENST00000366595 PRB3Q04118 309 aaPredicted RBP13.59□□□□□ -0.23
NID1-202ENST00000366595 LCNL1Q6ZST4 164 aa13.59□□□□□ -0.23
NID1-202ENST00000366595 NTN3O00634 580 aaPredicted RBP13.59□□□□□ -0.23
NID1-202ENST00000366595 RPL35AP18077 110 aaKnown RBP13.59□□□□□ -0.23
NID1-202ENST00000366595 YPEL3P61236 119 aaPredicted RBP13.59□□□□□ -0.23
NID1-202ENST00000366595 BVES-AS1Q5T3Y7 98 aa13.59□□□□□ -0.23
NID1-202ENST00000366595 MCRIP2Q9BUT9 160 aaKnown RBP13.59□□□□□ -0.23
NID1-202ENST00000366595 ITGB4P16144 1822 aa13.59□□□□□ -0.23
NID1-202ENST00000366595 CD177Q8N6Q3 437 aa13.59□□□□□ -0.23
NID1-202ENST00000366595 RMI2Q96E14 147 aa13.59□□□□□ -0.23
NID1-202ENST00000366595 POU2AF1Q16633 256 aa13.58□□□□□ -0.23
NID1-202ENST00000366595 FOCADQ5VW36 1801 aa13.58□□□□□ -0.23
NID1-202ENST00000366595 ZCCHC24Q8N2G6 241 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms