RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 CRYGAP11844 174 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 PTHLHP12272 177 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 PIPP12273 146 aaPredicted RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 FKBP2P26885 142 aaKnown RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 BTCP35070 178 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 CXCL5P42830 114 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 PPICP45877 212 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 NMUP48645 174 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 MTPNP58546 118 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 TAS2R45P59539 299 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 PPP1CAP62136 330 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 MRPS36P82909 103 aaKnown RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF85Q03923 595 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 DAZ2Q13117 558 aaKnown RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 DIAPH2-AS1Q14236 149 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF726P1Q15940 193 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 PRR4Q16378 134 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 PSMG4Q5JS54 123 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 MRPL2Q5T653 305 aaKnown RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 LINC01545Q5VT33 79 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 LAIR2Q6ISS4 152 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 C22orf39Q6P5X5 142 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 AAED1Q7RTV5 226 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF571Q7Z3V5 609 aaPredicted RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 TMEM179BQ7Z7N9 219 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 DAZ4Q86SG3 579 aaKnown RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRAPPC6BQ86SZ2 158 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF101Q8IZC7 436 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 NPWQ8N729 165 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 OR5H2Q8NGV7 314 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 PPDPFLQ8WWR9 84 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 NEURL3Q96EH8 262 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 SLC25A44Q96H78 314 aaPredicted RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 CARD19Q96LW7 228 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 EIF5A2Q9GZV4 153 aaKnown RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 AICDAQ9GZX7 198 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 CXXC4Q9H2H0 198 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 BCL2L10Q9HD36 194 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 NRN1Q9NPD7 142 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 DAZ1Q9NQZ3 744 aaKnown RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 DAZ3Q9NR90 486 aaKnown RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 C21orf62Q9NYP8 219 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 MTFP1Q9UDX5 166 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 DLC1Q96QB1 1528 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 RGPD4Q7Z3J3 1758 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 SCN1AP35498 2009 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 CEP170Q5SW79 1584 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 AHDC1Q5TGY3 1603 aaPredicted RBP1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 ALKQ9UM73 1620 aa1.33□□□□□ -2.2
RNU4-42P-201ENST00000364738 HELZP42694 1942 aaKnown RBP1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 DENND4CQ5VZ89 1909 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 BAZ2AQ9UIF9 1905 aaKnown RBP1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 PLCH1Q4KWH8 1693 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 TNRC6AQ8NDV7 1962 aaKnown RBP1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 MRC1P22897 1456 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 DOCK3Q8IZD9 2030 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 NUP205Q92621 2012 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 ITGB4P16144 1822 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRBV20-1A0A075B6N2 111 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRAV9-1A0A075B6T8 112 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRBV6-7A0A0A0MS04 114 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 A0A0A6YYD4 124 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 TRAV8-1A0A0A6YYK1 113 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 A0A0J9YW62 118 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 LOC107986453A0A1B0GWG9 222 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 PLAC8L1A1L4L8 177 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF727A8MUV8 499 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 C11orf98E9PRG8 122 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 F6UB75 175 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 SYS1-DBNDD2H3BUS1 97 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 H3BUT2 72 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 J3QT63 122 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 K7N7A8 449 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 UPK2O00526 184 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 GNGT2O14610 69 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 NDUFB3O43676 98 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 NDUFS5O43920 106 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 SSSCA1O60232 199 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 PDCD6O75340 191 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 ZNF737O75373 536 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 PGLYRP1O75594 196 aaPredicted RBP1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 NDUFB2O95178 105 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGHV3-23P01764 117 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 RBP4P02753 201 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 CD3DP04234 171 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 IGKV5-2P06315 115 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 SMIM13P0DJ93 91 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 COX7CP15954 63 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 IL3RAP26951 378 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 HLA-DMBP28068 263 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 LIM2P55344 173 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 RPS11P62280 158 aaKnown RBP eCLIP1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 FKBP1AP62942 108 aaKnown RBP1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 QRFPP83859 136 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 CDK5R1Q15078 307 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 MPV17LQ2QL34 196 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 SPRNQ5BIV9 151 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 MS4A13Q5J8X5 152 aa1.32□□□□□ -2.2
RNU4-42P-201ENST00000364738 TMEM91Q6ZNR0 172 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms