RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 CECR2Q9BXF3 1484 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 TCRBV4S1A1TA0A5B7 111 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 CCDC160A6NGH7 325 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 HMGB3O15347 200 aaKnown RBP0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 NUPR1O60356 82 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 IFNA7P01567 189 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 DYNLT3P51808 116 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 UBE2BP63146 152 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 GNG5P63218 68 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 C1orf134Q5TEV5 83 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 HACD4Q5VWC8 232 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 Q8TAT8 98 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 C4orf3Q8WVX3 66 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 LINC00052Q96N35 136 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 YPEL2Q96QA6 119 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 GPER1Q99527 375 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 RASL12Q9NYN1 266 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 PYCARDQ9ULZ3 195 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 ANKRD31Q8N7Z5 1873 aa0.37□□□□□ -2.35
RNU4-56P-201ENST00000364700 NUP210Q8TEM1 1887 aaPredicted RBP0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 IGHV1-58A0A0C4DH39 117 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 MFSD11O43934 449 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 HLA-EP13747 358 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 RHOBP62745 196 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 MRPS25P82663 173 aaKnown RBP0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 CARD19Q96LW7 228 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 LYSMD1Q96S90 227 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 GPX7Q96SL4 187 aaPredicted RBP0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 AMELYQ99218 206 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 SLC25A21Q9BQT8 299 aaPredicted RBP0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 TMEM70Q9BUB7 260 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 SH3BGRL3Q9H299 93 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 PCTPQ9UKL6 214 aa0.36□□□□□ -2.35
RNU4-56P-201ENST00000364700 TLCD2A6NGC4 264 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 TMEM238C9JI98 176 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 GGCTO75223 188 aaKnown RBP0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 PIAS1O75925 651 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 CSN2P05814 226 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 PSG9Q00887 426 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 TMED2Q15363 201 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 PHF5AQ7RTV0 110 aaKnown RBP0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 OR2T35Q8NGX2 323 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 ZC2HC1AQ96GY0 325 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 GINS3Q9BRX5 216 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 C6orf62Q9GZU0 229 aaPredicted RBP0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 PSTPIP2Q9H939 334 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 TAS2R7Q9NYW3 318 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 SS18L2Q9UHA2 77 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 CD109Q6YHK3 1445 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 MEGF8Q7Z7M0 2845 aa0.35□□□□□ -2.35
RNU4-56P-201ENST00000364700 USP24Q9UPU5 2620 aa0.34□□□□□ -2.35
RNU4-56P-201ENST00000364700 TRAV10A0A0B4J240 114 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 DUXBA0A1W2PPF3 345 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 NFYBP25208 207 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 EFNA4P52798 201 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 GNG3P63215 75 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 BCL2L15Q5TBC7 163 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 TMEM14EPQ6UXP3 125 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 LINC00322Q6ZN03 302 aaPredicted RBP0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 SMIM20Q8N5G0 67 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 NUP35Q8NFH5 326 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 CDC26Q8NHZ8 85 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 TMEM254Q8TBM7 123 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 PSMF1Q92530 271 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 POP5Q969H6 163 aaKnown RBP0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 TP53RKQ96S44 253 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 PRRT1Q99946 306 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 PAIP2Q9BPZ3 127 aaKnown RBP0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 NPCDR1Q9BY65 106 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 PBOV1Q9GZY1 135 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 POPDC3Q9HBV1 291 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 LYRM2Q9NU23 88 aaPredicted RBP0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 RNF11Q9Y3C5 154 aa0.34□□□□□ -2.36
RNU4-56P-201ENST00000364700 PIK3C2AO00443 1686 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 KDM6AO15550 1401 aaPredicted RBP0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 ATG12O94817 140 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 IFNA1P01562 189 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 TRGC2P03986 189 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 CXCL1P09341 107 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 ARPP19P56211 112 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 C4orf22Q6V702 233 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 SBSPONQ8IVN8 264 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 ST6GALNAC3Q8NDV1 305 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 AP3S1Q92572 193 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 PHB2Q99623 299 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 LY96Q9Y6Y9 160 aa0.33□□□□□ -2.36
RNU4-56P-201ENST00000364700 UHRF1BP1Q6BDS2 1440 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 TRAV5A0A0B4J249 113 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 H7C1C5 153 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 AIPO00170 330 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 KLF7O75840 302 aaPredicted RBP0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 NDUFC2O95298 119 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 PHBP35232 272 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 LCN6P62502 163 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 AKR1C8PQ5T2L2 129 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 GLIPR1L1Q6UWM5 242 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 OR5D14Q8NGL3 314 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 PLEKHB2Q96CS7 222 aa0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 HOPXQ9BPY8 73 aaPredicted RBP0.32□□□□□ -2.36
RNU4-56P-201ENST00000364700 GGACTQ9BVM4 153 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms