RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 FAM223BA6NKX1 122 aa16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 GNG5P63218 68 aa16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 TREML4Q6UXN2 200 aa16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 FAM223AQ8IWN6 122 aa16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 IFI27P40305 119 aaPredicted RBP16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 UBE2E1P51965 193 aa16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 FAM90A2PQ658T7 463 aa16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 LYPD2Q6UXB3 125 aa16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 SRSF8Q9BRL6 282 aaKnown RBP16.8■□□□□ 0.28
NCKAP1-201ENST00000360982 F2Z2F3 143 aa16.79■□□□□ 0.28
NCKAP1-201ENST00000360982 DEFB121Q5J5C9 76 aa16.79■□□□□ 0.28
NCKAP1-201ENST00000360982 C3orf79P0CE67 100 aa16.79■□□□□ 0.28
NCKAP1-201ENST00000360982 ARFGEF3Q5TH69 2177 aa16.79■□□□□ 0.28
NCKAP1-201ENST00000360982 Q6ZS49 121 aa16.79■□□□□ 0.28
NCKAP1-201ENST00000360982 LCNL1Q6ZST4 164 aa16.79■□□□□ 0.28
NCKAP1-201ENST00000360982 NCOR1P1Q9H4R4 102 aa16.79■□□□□ 0.28
NCKAP1-201ENST00000360982 OCIAD2Q56VL3 154 aa16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 LCN12Q6JVE5 192 aa16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 ANAPC13Q9BS18 74 aa16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 VCX2Q9H322 139 aa16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 NHP2Q9NX24 153 aaKnown RBP16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 RNASE1P07998 156 aaKnown RBP16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 ERVK11-1P61568 191 aa16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 CRPP02741 224 aa16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 GGTLC1Q9BX51 225 aa16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 GTSF1LQ9H1H1 148 aa16.78■□□□□ 0.28
NCKAP1-201ENST00000360982 CNTFRP26992 372 aa16.77■□□□□ 0.28
NCKAP1-201ENST00000360982 C5orf63A6NC05 138 aa16.77■□□□□ 0.28
NCKAP1-201ENST00000360982 MALP21145 153 aa16.77■□□□□ 0.28
NCKAP1-201ENST00000360982 GATA4P43694 442 aa16.77■□□□□ 0.28
NCKAP1-201ENST00000360982 NAA38Q9BRA0 125 aaKnown RBP16.77■□□□□ 0.28
NCKAP1-201ENST00000360982 AGMATQ9BSE5 352 aa16.77■□□□□ 0.28
NCKAP1-201ENST00000360982 RPP25LQ8N5L8 163 aaKnown RBP16.77■□□□□ 0.27
NCKAP1-201ENST00000360982 CST9LQ9H4G1 147 aa16.77■□□□□ 0.27
NCKAP1-201ENST00000360982 PHF3Q92576 2039 aaKnown RBP16.77■□□□□ 0.27
NCKAP1-201ENST00000360982 LINC01549A6NIU2 74 aa16.77■□□□□ 0.27
NCKAP1-201ENST00000360982 ZNF688P0C7X2 276 aa16.77■□□□□ 0.27
NCKAP1-201ENST00000360982 CKS1BP61024 79 aa16.77■□□□□ 0.27
NCKAP1-201ENST00000360982 ZNF329Q86UD4 541 aa16.77■□□□□ 0.27
NCKAP1-201ENST00000360982 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.27
NCKAP1-201ENST00000360982 CUL9Q8IWT3 2517 aa16.76■□□□□ 0.27
NCKAP1-201ENST00000360982 PMS2P5A8MQ11 134 aa16.76■□□□□ 0.27
NCKAP1-201ENST00000360982 GCSAMLQ5JQS6 135 aa16.76■□□□□ 0.27
NCKAP1-201ENST00000360982 PLXNA3P51805 1871 aa16.76■□□□□ 0.27
NCKAP1-201ENST00000360982 CDPF1Q6NVV7 123 aa16.76■□□□□ 0.27
NCKAP1-201ENST00000360982 PRADC1Q9BSG0 188 aa16.76■□□□□ 0.27
NCKAP1-201ENST00000360982 Q8TCH9 128 aa16.76■□□□□ 0.27
NCKAP1-201ENST00000360982 SLC25A39Q9BZJ4 359 aaPredicted RBP16.76■□□□□ 0.27
NCKAP1-201ENST00000360982 MGAMO43451 1857 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 RPRMLQ8N4K4 120 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 FOXC2Q99958 501 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 NXT2Q9NPJ8 142 aaKnown RBP16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 ESDP10768 282 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 KLF17Q5JT82 389 aaPredicted RBP16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 ASCL4Q6XD76 172 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 VGLL1Q99990 258 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 MS4A6AQ9H2W1 248 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 NMSQ5H8A3 153 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 ZGRF1Q86YA3 2104 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 CHCHD5Q9BSY4 110 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 CYSLTR1Q9Y271 337 aa16.75■□□□□ 0.27
NCKAP1-201ENST00000360982 A0A087WX48 190 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 J3QLI3 93 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 Q96MF0 132 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 LRRK1Q38SD2 2015 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 SPG11Q96JI7 2443 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 STAG3L3P0CL85 134 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 IGKV1-5P01602 117 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 SAMD5Q5TGI4 173 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 RPL15P61313 204 aaKnown RBP16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 HSD52Q0P140 79 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 ZNF562Q6V9R5 426 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 UBE2DNLQ8IWF7 75 aa16.74■□□□□ 0.27
NCKAP1-201ENST00000360982 GTF3C1Q12789 2109 aa16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 IGHV1-69DA0A0B4J2H0 117 aa16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 GHRHP01286 108 aa16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 IGHV1-69P01742 117 aa16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 PFN1P07737 140 aaKnown RBP16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 LINC00477Q96M19 166 aa16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 COL4A6Q14031 1691 aa16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 ORMDL2Q53FV1 153 aa16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 OR9G4Q8NGQ1 327 aa16.73■□□□□ 0.27
NCKAP1-201ENST00000360982 ZNF138P52744 262 aa16.72■□□□□ 0.27
NCKAP1-201ENST00000360982 CR1LQ2VPA4 569 aa16.72■□□□□ 0.27
NCKAP1-201ENST00000360982 TMEM14EPQ6UXP3 125 aa16.72■□□□□ 0.27
NCKAP1-201ENST00000360982 DAZ1Q9NQZ3 744 aaKnown RBP16.72■□□□□ 0.27
NCKAP1-201ENST00000360982 SRSF1Q07955 248 aaKnown RBP eCLIP16.72■□□□□ 0.27
NCKAP1-201ENST00000360982 EP400Q96L91 3159 aa16.72■□□□□ 0.27
NCKAP1-201ENST00000360982 LINC00473A8K010 186 aa16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 SCRT1Q9BWW7 348 aa16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 PROK2Q9HC23 129 aa16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 SEPSECSQ9HD40 501 aaKnown RBP16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 NPIPB5A8MRT5 1133 aa16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 ZNF415Q09FC8 603 aa16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 DMRTC2Q8IXT2 367 aaPredicted RBP16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 RHPN1-AS1Q9BWJ2 59 aa16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 BEX4Q9NWD9 120 aaPredicted RBP16.71■□□□□ 0.27
NCKAP1-201ENST00000360982 A0A087X0K7 114 aa16.7■□□□□ 0.26
NCKAP1-201ENST00000360982 SRRM4A7MD48 611 aaKnown RBP16.7■□□□□ 0.26
NCKAP1-201ENST00000360982 SCGB1A1P11684 91 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms