RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 HIST2H2BCQ6DN03 193 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 BAGE3Q86Y29 109 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 BAGE2Q86Y30 109 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 CFHR4Q92496 578 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 FAM168AQ92567 244 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 SIRPDQ9H106 197 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 ACTL6BO94805 426 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 MFAP2P55001 183 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 SPATA31B1PQ5VZV4 182 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 VSTM2AQ8TAG5 236 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 P2RX4Q99571 388 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 SIGMAR1Q99720 223 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 SLC39A9Q9NUM3 307 aa10.07□□□□□ -0.8
GGPS1-202ENST00000358966 AMMECR1Q9Y4X0 333 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-202ENST00000358966 SOX21Q9Y651 276 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-202ENST00000358966 CRISP2P16562 243 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 PPP1R27Q86WC6 154 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 ANAPC16Q96DE5 110 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 HECTD1Q9ULT8 2610 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 THYN1Q9P016 225 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 TP73-AS1Q9UF72 201 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 LSM4Q9Y4Z0 139 aaKnown RBP10.06□□□□□ -0.8
GGPS1-202ENST00000358966 FASNP49327 2511 aaKnown RBP10.06□□□□□ -0.8
GGPS1-202ENST00000358966 TRAV1-1A0A0B4J248 108 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 CRYGBP07316 175 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 OPRK1P41145 380 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 FAM120AOSQ5T036 256 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 DEFB125Q8N687 156 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 STPG3Q8N7X2 389 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 NPVFQ9HCQ7 196 aa10.06□□□□□ -0.8
GGPS1-202ENST00000358966 ZNF253O75346 499 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 GPX1P07203 203 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 OR10J4P0C629 311 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 TEPPQ6URK8 271 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 BRD3OSQ6XYD6 125 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 NRN1Q9NPD7 142 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 TIMM9Q9Y5J7 89 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 ITPR3Q14573 2671 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 MUC21A0A0G2JKD1 596 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 MUC21A0A140T8X8 626 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 SH2D7A6NKC9 451 aaPredicted RBP10.05□□□□□ -0.8
GGPS1-202ENST00000358966 CRYGCP07315 174 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 SAA4P35542 130 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 RPL27AP46776 148 aaKnown RBP10.05□□□□□ -0.8
GGPS1-202ENST00000358966 ERHP84090 104 aaKnown RBP10.05□□□□□ -0.8
GGPS1-202ENST00000358966 MUC21Q5SSG8 566 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 CACNG8Q8WXS5 425 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 EAF1Q96JC9 268 aaPredicted RBP10.05□□□□□ -0.8
GGPS1-202ENST00000358966 S4R3C0 116 aa10.05□□□□□ -0.8
GGPS1-202ENST00000358966 GAGE10A6NGK3 116 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 NCBP2LA6PVI3 153 aaKnown RBP10.04□□□□□ -0.8
GGPS1-202ENST00000358966 RAB31Q13636 194 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 C2orf83Q53S99 150 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 KLF17Q5JT82 389 aaPredicted RBP10.04□□□□□ -0.8
GGPS1-202ENST00000358966 C10orf105Q8TEF2 133 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 SRSF12Q8WXF0 261 aaKnown RBP10.04□□□□□ -0.8
GGPS1-202ENST00000358966 CUBNO60494 3623 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 C17orf112F2Z3M2 114 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 NUDT3O95989 172 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 ZNF90Q03938 601 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 DERL1Q9BUN8 251 aa10.04□□□□□ -0.8
GGPS1-202ENST00000358966 ACANP16112 2415 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 TEX22C9J3V5 150 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 CNIH1O95406 144 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 C3orf79P0CE67 100 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 HERV-K104P63124 156 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 NDPQ00604 133 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 CD69Q07108 199 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 MMD2Q8IY49 270 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 TEX45Q8NA69 505 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 AJUBAQ96IF1 538 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 PIMREGQ9BSJ6 248 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 PRRC2AP48634 2157 aaKnown RBP10.03□□□□□ -0.8
GGPS1-202ENST00000358966 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
GGPS1-202ENST00000358966 FOXH1O75593 365 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 MOSP00540 346 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 COX6B1P14854 86 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 AMTP48728 403 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 OR4A5Q8NH83 315 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 NPIPB3Q92617 1050 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 CHRDL1Q9BU40 450 aa10.03□□□□□ -0.8
GGPS1-202ENST00000358966 CTXND1A0A1B0GTU2 59 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 LCN12Q6JVE5 192 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 NOTCH2Q04721 2471 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 TRAV40A0A0B4J280 105 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 K7EQM0 130 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 NBR2O15453 112 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 BRI3O95415 125 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 ARL14EPLP0DKL9 152 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 PMCHP20382 165 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 CBLN1P23435 193 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 MORN5Q5VZ52 161 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 NEGR1Q7Z3B1 354 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 SS18L2Q9UHA2 77 aa10.02□□□□□ -0.81
GGPS1-202ENST00000358966 SLC25A33Q9BSK2 321 aa10.01□□□□□ -0.81
GGPS1-202ENST00000358966 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
GGPS1-202ENST00000358966 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms