RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 PAQR4Q8N4S7 273 aaPredicted RBP9.16□□□□□ -0.94
COL11A1-202ENST00000358392 SRSF8Q9BRL6 282 aaKnown RBP9.16□□□□□ -0.94
COL11A1-202ENST00000358392 FGF16O43320 207 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 CD5P06127 495 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 FOXF2Q12947 444 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 GFI1Q99684 422 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 IGHV1-3A0A0C4DH29 117 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 SP7Q8TDD2 431 aaPredicted RBP9.16□□□□□ -0.94
COL11A1-202ENST00000358392 TSSC4Q9Y5U2 329 aaPredicted RBP9.16□□□□□ -0.94
COL11A1-202ENST00000358392 LINC00479Q96M42 142 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 MAP1BP46821 2468 aaKnown RBP9.16□□□□□ -0.94
COL11A1-202ENST00000358392 WDR83OSQ9Y284 106 aa9.16□□□□□ -0.94
COL11A1-202ENST00000358392 EREGO14944 169 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 TCTEX1D4Q5JR98 221 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 LRRK1Q38SD2 2015 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 hADV29S1A0JD25 119 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 PYY3Q5JQD4 70 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 TRACP01848 142 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 MPZP25189 248 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 ID3Q02535 119 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 NXPH4O95158 308 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 FREM3P0C091 2139 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 MLANAQ16655 118 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 SPSB3Q6PJ21 355 aa9.15□□□□□ -0.94
COL11A1-202ENST00000358392 GBF1Q92538 1859 aa9.15□□□□□ -0.95
COL11A1-202ENST00000358392 IGHV3-38A0A0C4DH36 116 aa9.15□□□□□ -0.95
COL11A1-202ENST00000358392 TINCRA0A1B0GVN0 87 aa9.15□□□□□ -0.95
COL11A1-202ENST00000358392 CGB3P0DN86 165 aa9.15□□□□□ -0.95
COL11A1-202ENST00000358392 ADAMTSL3P82987 1691 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 TRAV26-2A0A0B4J265 109 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 NTF4P34130 210 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 PIP4P2Q8N4L2 257 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 MESP1Q9BRJ9 268 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 ASPHD1Q5U4P2 390 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 KLK9Q9UKQ9 250 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 RTTNQ86VV8 2226 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 H3BUX3 64 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 CFHR2P36980 270 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 LINC00114Q6XXX2 140 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 CYTL1Q9NRR1 136 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 TMEM242Q9NWH2 141 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 NYNRINQ9P2P1 1898 aaKnown RBP9.14□□□□□ -0.95
COL11A1-202ENST00000358392 GREB1Q4ZG55 1949 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 TRBV24-1A0A075B6N3 115 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 IGKV1-12A0A0C4DH73 117 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 GAGE12JA6NER3 117 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 IGKV1D-12P01611 117 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 GAGE4Q13068 117 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 GAGE5Q13069 117 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 CLPSL2Q6UWE3 100 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 THAP8Q8NA92 274 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 AHCTF1Q8WYP5 2266 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 TMEM213A2RRL7 107 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 CEACAM8P31997 349 aaPredicted RBP9.14□□□□□ -0.95
COL11A1-202ENST00000358392 DTX1Q86Y01 620 aa9.14□□□□□ -0.95
COL11A1-202ENST00000358392 A0A1W2PR77 199 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 IGHG3P01860 377 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 IFI6P09912 130 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 NKAPP1Q8N9T2 125 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 PLXNA1Q9UIW2 1896 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 IGHV1-8P0DP01 117 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 ZNF672Q499Z4 452 aaPredicted RBP9.13□□□□□ -0.95
COL11A1-202ENST00000358392 GLI3P10071 1580 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 A0A096LPF7 62 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 IFITM1P13164 125 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 FOXG1P55316 489 aaPredicted RBP9.13□□□□□ -0.95
COL11A1-202ENST00000358392 DEFB105AQ8NG35 78 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 LIME1Q9H400 295 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 KIAA2026Q5HYC2 2103 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 IGKV1-27A0A075B6S5 117 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 TRBV7-1A0A0A6YYK4 115 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 RPP25LQ8N5L8 163 aaKnown RBP9.13□□□□□ -0.95
COL11A1-202ENST00000358392 CD177Q8N6Q3 437 aa9.13□□□□□ -0.95
COL11A1-202ENST00000358392 SLC25A16P16260 332 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 IL17RELQ6ZVW7 336 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 LY6G5BQ8NDX9 201 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 A0A1B0GWJ7 208 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 CLPSP04118 112 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 ZNF581Q9P0T4 197 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 POLR3KQ9Y2Y1 108 aaPredicted RBP9.12□□□□□ -0.95
COL11A1-202ENST00000358392 FAM90A9PA6NNJ1 464 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 ARMS2P0C7Q2 107 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 TRGV9Q99603 122 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 CGB7P0DN87 165 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 NEGR1Q7Z3B1 354 aa9.12□□□□□ -0.95
COL11A1-202ENST00000358392 F5H768 121 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 MMP23AO75900 390 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 RNASE13Q5GAN3 156 aaKnown RBP9.11□□□□□ -0.95
COL11A1-202ENST00000358392 LY6HO94772 140 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 DSCR8Q96T75 97 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 K7ERJ3 54 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 PSPNO60542 156 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 SYNJ2BPP57105 145 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 ZNRD1Q9P1U0 126 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 XCL2Q9UBD3 114 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 H0YJW9 148 aa9.11□□□□□ -0.95
COL11A1-202ENST00000358392 ARID2Q68CP9 1835 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms