RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TRBV19A0A075B6N1 114 aa14.06□□□□□ -0.16
RTN4-204ENST00000357732 OVOL3O00110 214 aa14.06□□□□□ -0.16
RTN4-204ENST00000357732 RHOGP84095 191 aa14.06□□□□□ -0.16
RTN4-204ENST00000357732 PRNTQ86SH4 94 aa14.06□□□□□ -0.16
RTN4-204ENST00000357732 CIARTQ8N365 385 aaPredicted RBP14.06□□□□□ -0.16
RTN4-204ENST00000357732 SHANK2-AS3Q9BTD1 123 aa14.06□□□□□ -0.16
RTN4-204ENST00000357732 IGHV3-72A0A0B4J1Y9 119 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 BUB1B-PAK6H3BSN5 160 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 M0QZ24 198 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 RP1L1Q8IWN7 2480 aaPredicted RBP14.05□□□□□ -0.16
RTN4-204ENST00000357732 DEFB125Q8N687 156 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 NEU4Q8WWR8 484 aaPredicted RBP14.05□□□□□ -0.16
RTN4-204ENST00000357732 SRSF12Q8WXF0 261 aaKnown RBP14.05□□□□□ -0.16
RTN4-204ENST00000357732 DPF1Q92782 380 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 AP5S1Q9NUS5 200 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 CSN1S1P47710 185 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 BVES-AS1Q5T3Y7 98 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 DYNLRB1Q9NP97 96 aa14.05□□□□□ -0.16
RTN4-204ENST00000357732 RALYQ9UKM9 306 aaKnown RBP14.05□□□□□ -0.16
RTN4-204ENST00000357732 H3BRN7 92 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 KLK10O43240 276 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 HIST1H1AQ02539 215 aaPredicted RBP14.04□□□□□ -0.16
RTN4-204ENST00000357732 MPV17L2Q567V2 206 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 LINC00173Q6ZV60 143 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 SERTM2A0A1B0GWG4 89 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 ZNF493Q6ZR52 646 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 OR4C5Q8NGB2 326 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 SH3BGRL2Q9UJC5 107 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 AKAP13Q12802 2813 aa14.04□□□□□ -0.16
RTN4-204ENST00000357732 TRAV8-1A0A0A6YYK1 113 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 hDV102S1A0JD36 115 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 CNTFRP26992 372 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 PSG3Q16557 428 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 BSNQ9UPA5 3926 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 H3BTX0 84 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 IGKV1-17P01599 117 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 PDE6HQ13956 83 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 SIGLEC15Q6ZMC9 328 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 EXOC3-AS1Q8N2X6 119 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 OR10AG1Q8NH19 301 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 ZC2HC1AQ96GY0 325 aa14.03□□□□□ -0.16
RTN4-204ENST00000357732 NUDT3O95989 172 aa14.02□□□□□ -0.16
RTN4-204ENST00000357732 CD24P25063 80 aa14.02□□□□□ -0.16
RTN4-204ENST00000357732 LHFPL4Q7Z7J7 247 aa14.02□□□□□ -0.16
RTN4-204ENST00000357732 ARL6IP6Q8N6S5 226 aa14.02□□□□□ -0.16
RTN4-204ENST00000357732 PRSS33Q8NF86 280 aa14.02□□□□□ -0.16
RTN4-204ENST00000357732 TMUB1Q9BVT8 246 aa14.02□□□□□ -0.16
RTN4-204ENST00000357732 PSG8Q9UQ74 426 aa14.02□□□□□ -0.16
RTN4-204ENST00000357732 LOC105371242A0A075B767 164 aa14.02□□□□□ -0.17
RTN4-204ENST00000357732 IGHV3-21A0A0B4J1V1 117 aa14.02□□□□□ -0.17
RTN4-204ENST00000357732 PCP4P48539 62 aa14.02□□□□□ -0.17
RTN4-204ENST00000357732 RBX1P62877 108 aa14.02□□□□□ -0.17
RTN4-204ENST00000357732 TAX1BP3O14907 124 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 CDKN1BP46527 198 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 VAMP3Q15836 100 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 RPEQ96AT9 228 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 ZNF747Q9BV97 191 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 ZNF785A8K8V0 405 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 CD5LO43866 347 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 ARMS2P0C7Q2 107 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 FA2HQ7L5A8 372 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 RAB1BQ9H0U4 201 aa14.01□□□□□ -0.17
RTN4-204ENST00000357732 FBLL1A6NHQ2 334 aaKnown RBP14□□□□□ -0.17
RTN4-204ENST00000357732 SHISA9B4DS77 424 aa14□□□□□ -0.17
RTN4-204ENST00000357732 TOX4O94842 621 aa14□□□□□ -0.17
RTN4-204ENST00000357732 COX8AP10176 69 aa14□□□□□ -0.17
RTN4-204ENST00000357732 RNASE8Q8TDE3 154 aaKnown RBP14□□□□□ -0.17
RTN4-204ENST00000357732 FBXL15Q9H469 300 aa14□□□□□ -0.17
RTN4-204ENST00000357732 B9A039 149 aa14□□□□□ -0.17
RTN4-204ENST00000357732 K7EIM0 57 aa14□□□□□ -0.17
RTN4-204ENST00000357732 KALRNO60229 2985 aa14□□□□□ -0.17
RTN4-204ENST00000357732 APELAP0DMC3 54 aa14□□□□□ -0.17
RTN4-204ENST00000357732 CT45A10P0DMU9 189 aa14□□□□□ -0.17
RTN4-204ENST00000357732 Q6ZVH6 145 aa14□□□□□ -0.17
RTN4-204ENST00000357732 ZNF48Q96MX3 618 aaPredicted RBP14□□□□□ -0.17
RTN4-204ENST00000357732 ARFGEF3Q5TH69 2177 aa13.99□□□□□ -0.17
RTN4-204ENST00000357732 CUL9Q8IWT3 2517 aa13.99□□□□□ -0.17
RTN4-204ENST00000357732 APOBEC3AP31941 199 aaPredicted RBP13.99□□□□□ -0.17
RTN4-204ENST00000357732 COX8CQ7Z4L0 72 aa13.99□□□□□ -0.17
RTN4-204ENST00000357732 PRSS3P2Q8NHM4 247 aa13.99□□□□□ -0.17
RTN4-204ENST00000357732 RNF125Q96EQ8 232 aa13.99□□□□□ -0.17
RTN4-204ENST00000357732 ATMQ13315 3056 aa13.99□□□□□ -0.17
RTN4-204ENST00000357732 E7EQL1 145 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 LY6LH3BQJ8 138 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 MRPS12O15235 138 aaKnown RBP13.98□□□□□ -0.17
RTN4-204ENST00000357732 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 U3KQK5 164 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 CEP250Q9BV73 2442 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 WI2-2373I1.2A0A1W2PRP0 233 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 PLGLAQ15195 96 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 ZNF414Q96IQ9 312 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 ADGRG4Q8IZF6 3080 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 ROS1P08922 2347 aa13.98□□□□□ -0.17
RTN4-204ENST00000357732 GPR183P32249 361 aa13.97□□□□□ -0.17
RTN4-204ENST00000357732 OR1N2Q8NGR9 330 aa13.97□□□□□ -0.17
RTN4-204ENST00000357732 ABHD17AQ96GS6 310 aa13.97□□□□□ -0.17
RTN4-204ENST00000357732 AAMDCQ9H7C9 122 aa13.97□□□□□ -0.17
RTN4-204ENST00000357732 ZNF138P52744 262 aa13.97□□□□□ -0.17
RTN4-204ENST00000357732 DLX1P56177 255 aa13.97□□□□□ -0.17
RTN4-204ENST00000357732 SEC11AP67812 179 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms