RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 HIGD1BQ9P298 99 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 A0A1W2PRD5 423 aa11.71□□□□□ -0.53
TOP3B-201ENST00000357179 A0A1W2PRF3 423 aa11.71□□□□□ -0.53
TOP3B-201ENST00000357179 A0A1W2PRM7 423 aa11.71□□□□□ -0.53
TOP3B-201ENST00000357179 TCRBV4S1A1TA0A5B7 111 aa11.71□□□□□ -0.53
TOP3B-201ENST00000357179 PLAUP00749 431 aa11.71□□□□□ -0.53
TOP3B-201ENST00000357179 GCSHP23434 173 aa11.71□□□□□ -0.53
TOP3B-201ENST00000357179 C3orf36Q3SXR2 165 aa11.71□□□□□ -0.53
TOP3B-201ENST00000357179 RPUSD1Q9UJJ7 312 aaKnown RBP11.71□□□□□ -0.53
TOP3B-201ENST00000357179 TCRAP04437 139 aa11.71□□□□□ -0.54
TOP3B-201ENST00000357179 CT45A10P0DMU9 189 aa11.71□□□□□ -0.54
TOP3B-201ENST00000357179 HES3Q5TGS1 186 aa11.71□□□□□ -0.54
TOP3B-201ENST00000357179 OSR1Q8TAX0 266 aaPredicted RBP11.71□□□□□ -0.54
TOP3B-201ENST00000357179 RNF7Q9UBF6 113 aa11.71□□□□□ -0.54
TOP3B-201ENST00000357179 IGLV3-9A0A075B6K5 115 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 IGKV1D-37A0A075B6S9 117 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.7□□□□□ -0.54
TOP3B-201ENST00000357179 IGKV1-16P04430 117 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 ARMS2P0C7Q2 107 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 RIGQ13278 110 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 IGFL2Q6UWQ7 119 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 PIFOQ8TCI5 191 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 ZNF414Q96IQ9 312 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 GEMIN7Q9H840 131 aaKnown RBP11.7□□□□□ -0.54
TOP3B-201ENST00000357179 E9PLD3 99 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 K7ERJ3 54 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 SAA1P0DJI8 122 aaPredicted RBP11.7□□□□□ -0.54
TOP3B-201ENST00000357179 GAFA1Q96PS6 74 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 NDUFA4L2Q9NRX3 87 aa11.7□□□□□ -0.54
TOP3B-201ENST00000357179 SPRY3O43610 288 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 ERHP84090 104 aaKnown RBP11.69□□□□□ -0.54
TOP3B-201ENST00000357179 CDX4O14627 284 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-201ENST00000357179 ETDBQ3ZM63 59 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 ZNF833PQ6ZTB9 187 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 PCNX2A6NKB5 2137 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 DSCAML1Q8TD84 2053 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 CACNA1GO43497 2377 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 TRAV17A0A0B4J275 112 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 A0A1B0GW15 77 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 PLA2G2CQ5R387 149 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 Q86TA4 180 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 CIARTQ8N365 385 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-201ENST00000357179 THAP8Q8NA92 274 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 NBEAQ8NFP9 2946 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 NPIPB3Q92617 1050 aa11.69□□□□□ -0.54
TOP3B-201ENST00000357179 FAM201AQ5SY85 155 aa11.68□□□□□ -0.54
TOP3B-201ENST00000357179 MTURNQ8N3F0 131 aa11.68□□□□□ -0.54
TOP3B-201ENST00000357179 FRYLO94915 3013 aa11.68□□□□□ -0.54
TOP3B-201ENST00000357179 ARPC1AQ92747 370 aa11.68□□□□□ -0.54
TOP3B-201ENST00000357179 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
TOP3B-201ENST00000357179 HBDP02042 147 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 PAX8Q06710 450 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 DUX4L9Q6RFH8 374 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-201ENST00000357179 RBMXL3Q8N7X1 1067 aaKnown RBP11.67□□□□□ -0.54
TOP3B-201ENST00000357179 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 TM2D2Q9BX73 214 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 TANC2Q9HCD6 1990 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 MBD3L4A6NDZ8 208 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-201ENST00000357179 MBD3L3A6NE82 208 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-201ENST00000357179 MBD3L5A6NJ08 208 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-201ENST00000357179 M0R1B8 84 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 MBD3L2Q8NHZ7 208 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-201ENST00000357179 CHAC1Q9BUX1 264 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 Q9H3A6 140 aa11.67□□□□□ -0.54
TOP3B-201ENST00000357179 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 hADV38S2A0JD32 116 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 CCL11P51671 97 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 ATP5G2Q06055 141 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-201ENST00000357179 LINC00312Q9Y6C7 94 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 TRAV8-1A0A0A6YYK1 113 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 IGLL5B9A064 214 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 PSMG4Q5JS54 123 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 ZNF502Q8TBZ5 544 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 NHP2Q9NX24 153 aaKnown RBP11.66□□□□□ -0.54
TOP3B-201ENST00000357179 U3KQK5 164 aa11.66□□□□□ -0.54
TOP3B-201ENST00000357179 ZNF785A8K8V0 405 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 GP9P14770 177 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 TNFAIP6P98066 277 aaPredicted RBP11.65□□□□□ -0.54
TOP3B-201ENST00000357179 TEX36Q5VZQ5 186 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 TMEM167AQ8TBQ9 72 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 SRSF12Q8WXF0 261 aaKnown RBP11.65□□□□□ -0.54
TOP3B-201ENST00000357179 HARBI1Q96MB7 349 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 DKK2Q9UBU2 259 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 TECTAO75443 2155 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 D6R8Y8 96 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 H3BMG7 143 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 IGLV2-11P01706 119 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 SUB1P53999 127 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■■■□□ 14.7
TOP3B-201ENST00000357179 CCL13Q99616 98 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 MRPL36Q9P0J6 103 aaKnown RBP11.65□□□□□ -0.54
TOP3B-201ENST00000357179 PRO0461Q9UI25 63 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 DSCAMO60469 2012 aa11.65□□□□□ -0.54
TOP3B-201ENST00000357179 IGKV2D-26A0A0A0MRZ7 120 aa11.65□□□□□ -0.55
TOP3B-201ENST00000357179 TSPAN13O95857 204 aa11.65□□□□□ -0.55
TOP3B-201ENST00000357179 ORM2P19652 201 aa11.65□□□□□ -0.55
TOP3B-201ENST00000357179 C5orf64Q2M2E5 130 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms